Gene Information

Name : kdpE_2 (PFL_4569)
Accession : YP_261653.1
Strain : Pseudomonas protegens Pf-5
Genome accession: NC_004129
Putative virulence/resistance : Virulence
Product : KDP operon transcriptional regulatory protein KdpE
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 5277732 - 5278424 bp
Length : 693 bp
Strand : -
Note : identified by similarity to SP:P21866; match to protein family HMM PF00072; match to protein family HMM PF00486

DNA sequence : 
ATGAGCAGCGCACGCATCCTGATCGTCGAGGACGAAGCCAATATCCGCCGTTTCGTCGGTATCGCCCTGGAGGACGAAGG
TTTCCAGGTGTTCGAGGCCGACAGCGTCAAGCGCGCCCTGATCCATGCCGCCAGCCGCCAGCCGGACCTGGTGATCGTCG
ACCTGGGCCTGCCGGACGGCGACGGCAAGCAGTTGATCAGCGAGCTGCGCGGCTGGCTGGCGGTGCCGATCCTGGTGCTG
TCGGCCCGGGATCGGGAGGACGAGAAAGTCGCCGCCCTGGATGCCGGCGCCGACGACTACCTGGTCAAGCCGTTCGGCGT
GCCGGAACTGCTGGCGCGGATTCGCGCGCAACTGCGCCGTCATGGCCAGAGCGGTACGGCGGCCGCCACCAGCAAGGTGG
CCTTTGGTGCCATCGAGGTCGACCTGGCCACCCATGAGGTGCGCCGCGAAGGGCTGCCTGTGCACCTCACGCCGATCGAG
TACCGCCTGCTCTGCGCGCTGATCCGTGGCCAGAGCCGGGTGCTGACCCATCGCCAGTTGCTGCTGGAAGTCTGGGGCCT
GGACTACGTCGACCGCGCCCATTACCTGCGGGTACACATGGCCCATCTGCGGCAGAAGCTGGAGGCCGATCCGGCCCAGC
CCCAGCATCTGATCACCGAGTTGCAGGTGGGTTACCGCCTGGTGGGGCTGTGA

Protein sequence : 
MSSARILIVEDEANIRRFVGIALEDEGFQVFEADSVKRALIHAASRQPDLVIVDLGLPDGDGKQLISELRGWLAVPILVL
SARDREDEKVAALDAGADDYLVKPFGVPELLARIRAQLRRHGQSGTAAATSKVAFGAIEVDLATHEVRREGLPVHLTPIE
YRLLCALIRGQSRVLTHRQLLLEVWGLDYVDRAHYLRVHMAHLRQKLEADPAQPQHLITELQVGYRLVGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0091 AAM75294.1 EF0091 Not tested Not named Protein 2e-40 42
EF0571 NP_814337.1 DNA-binding response regulator Not tested Not named Protein 3e-40 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
kdpE_2 YP_261653.1 KDP operon transcriptional regulatory protein KdpE VFG1390 Protein 2e-29 43
kdpE_2 YP_261653.1 KDP operon transcriptional regulatory protein KdpE VFG1389 Protein 6e-29 41