|
Name : PFL_0457 (PFL_0457) Accession : YP_257601.1 Strain : Pseudomonas protegens Pf-5 Genome accession: NC_004129 Putative virulence/resistance : Unknown Product : LysR family transcriptional regulator Function : - COG functional category : K : Transcription COG ID : COG0583 EC number : - Position : 528652 - 529551 bp Length : 900 bp Strand : + Note : identified by match to protein family HMM PF00126; match to protein family HMM PF03466 DNA sequence : ATGGAACTGCGTCACCTGCGCTACTTCATCGCTGTCGCCGAAGAACTGCATTTTGGCCGTGCAGCCCAGGTGCTGGGCAT CTCCCAACCGCCCCTGAGCCAGCAGATCCAGGCGCTGGAGCAGGAGGTGGGGGCGCGCCTGTTCGAACGCACCAATCGTC GGGTCGAGCTCAGCGAGGCCGGGCGCCTGTTCCTGGAAGAGGCGCGGCTGGTACTGGCCCAGGTGGACAAGGCCGCGGAC GTGGCGCGGCGTGCGCAGCTGGGCGAGCTGGGGGAACTGAAGATCGGCTTCACCTCGTCGGCGCCCTTCAATTCGACCAT TCCCCAGGCGATCTTCGCCTTTCGCCAGCGCTTTCCCGCGGTACACCTCAAGCTCAAGGAGATGAGCAGCACCCAGGTGG CCGAGGCCCTGGTGGACCAGGCGATCCAGGTCGGCATCATGCGGCCCTTGCCCCTGCCGGATTCGCTGTCGGTGGTGGAG CTGCTGCGCGAGCCGCTGGTGGCGGTGCTCAGTTCCAAGCACCCGCTGGCCAGTGGCAGTGAAGAGGGGCTGCACCTGGC GGAGCTGGCCCATGAGCCCTTTGTGTTTTTCCCCCGCAGCTATGGCAGCGGCCTGTATGCGCAGTTGCTGAGCCTGTCCC GGGATGCCGGCTTTACCCCGCATTTCGCTCAGGAGGCGGCGGAAGCCATGACCATCATCGGCCTGGTGGCGGCGGGGTTG GGGGTGTCGGTGCTGCCGGCGTCCTACCAGCGCATGCGCATCGACGGCGTGGTCTATCGCCGCCTGCTGGACCCGGCGGC GATGTCGGCGGTGTGGCTGGTGCAGCGCAAGGATCAGGCTTCGCCCATGGCCAAGGCCTTTGTCGAGCTACTGACGCGCA AGACCGGGGCTACGCCCTGA Protein sequence : MELRHLRYFIAVAEELHFGRAAQVLGISQPPLSQQIQALEQEVGARLFERTNRRVELSEAGRLFLEEARLVLAQVDKAAD VARRAQLGELGELKIGFTSSAPFNSTIPQAIFAFRQRFPAVHLKLKEMSSTQVAEALVDQAIQVGIMRPLPLPDSLSVVE LLREPLVAVLSSKHPLASGSEEGLHLAELAHEPFVFFPRSYGSGLYAQLLSLSRDAGFTPHFAQEAAEAMTIIGLVAAGL GVSVLPASYQRMRIDGVVYRRLLDPAAMSAVWLVQRKDQASPMAKAFVELLTRKTGATP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| stmR | AAK97547.1 | StmR | Not tested | SPI-6 | Protein | 4e-47 | 41 |
