Gene Information

Name : arsC_1 (PFL_4456)
Accession : YP_261544.1
Strain : Pseudomonas protegens Pf-5
Genome accession: NC_004129
Putative virulence/resistance : Resistance
Product : arsenate reductase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1393
EC number : 1.20.4.1
Position : 5166206 - 5166559 bp
Length : 354 bp
Strand : +
Note : identified by match to protein family HMM PF03960; match to protein family HMM TIGR00014

DNA sequence : 
ATGACCGATCTGACGCTTTATCACAACCCGCGCTGCTCGAAATCCCGCGGTGCGCTGGAACTTCTGGAACAACGCGGCCT
GGCCCCGACCGTGGTCCGCTACCTGGAAACCCCACTGGATGCCGCCCAGTTGCGCAGCCTTCTGGCCAAGCTCGGCCTCA
ACGCGCGCCAGCTATTGCGCACCGGCGAGGACGAGTACAAGACCCTCAACCTGGCCGACCCGAGCCTCAGCGAAGAGCAA
CTGGTCGCCGCCATTGCCCAGCACCCGAAACTCATGGAGCGGCCGATTCTCGAAGCCGGCGACAAGGCCATCATTGGCCG
GCCGCCGGAAAACGTGCTGGAGATCCTGCCTTGA

Protein sequence : 
MTDLTLYHNPRCSKSRGALELLEQRGLAPTVVRYLETPLDAAQLRSLLAKLGLNARQLLRTGEDEYKTLNLADPSLSEEQ
LVAAIAQHPKLMERPILEAGDKAIIGRPPENVLEILP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsC2 YP_001007634.1 arsenate reductase Not tested YAPI Protein 1e-20 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
arsC_1 YP_261544.1 arsenate reductase BAC0585 Protein 1e-22 43
arsC_1 YP_261544.1 arsenate reductase BAC0583 Protein 6e-23 42
arsC_1 YP_261544.1 arsenate reductase BAC0584 Protein 2e-22 41