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Name : ldhA (PFL_4452) Accession : YP_261540.1 Strain : Pseudomonas protegens Pf-5 Genome accession: NC_004129 Putative virulence/resistance : Resistance Product : D-lactate dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1052 EC number : 1.1.1.28 Position : 5163540 - 5164529 bp Length : 990 bp Strand : + Note : identified by similarity to SP:P52643; match to protein family HMM PF00389; match to protein family HMM PF02826 DNA sequence : ATGCGTACGATTCTTTTCAGCAGCCAGAACTACGACCGCGAGAGTTTCCTCGGCGCTCAACTGCCAGCAGGCATCGAACT GCAATTCCAGGCCGCACGCCTGAGCCTGGATACCGCCGCCCTGGCTGAACGCCATGAAGTGGTCTGTGCCTTTATCAACG ACGACCTCAGTGCCCCGGTACTGGAACAGCTGGCTGCCGGTGGCACCCGCCTGATCGCTCTGCGCTCGGCCGGCTACAAC CACGTCGACCTGAGCGCGGCCCAGCGCCTGGGGCTGGATGTGGTGCGGGTCCCGGCCTATTCCCCCCATGCGGTCGCCGA ACATGCCGTGGCCCTGATCCTGGCGCTCAACCGCCGCCTGCACCGGGCCTACAACCGCACCCGCGAAGGCGACTTCACCC TGCACGGCCTGACCGGCTTCGACCTGGTGGGCAAGACCGTGGGCATTGTCGGCACCGGCCAGATCGGCGCCACCTTCGCC CGGATCATGGCCGGCTTCGGCTGCCAGCTGCTGGCGTACGACCCCTTCCCCAATCCCGCCGTAGAAGCCCTCGGTGCCCG TTACCTGGACCTGCCCGAGCTGCTGGCCCAGTCGCAGATCATCAGCCTGCACTGCCCGTTGACCGAGGACAGTCGTTACC TGATCAACCAGCAGAGCCTGGCCCACATGCAACCGGGAGCAATGCTGATCAACACCGGGCGTGGCGGCCTGGTGGACACC CCGGCGCTGATCGAGGCGCTCAAGAGCGGCCAACTGGGCTACCTGGGGCTGGATGTCTATGAAGAAGAGGCGCAACTGTT CTTCGAGGACCGCTCCGATCTACCCCTGCAGGATGACGTGCTGGCGCGGCTGCTGACCTTTCCCAACGTGATAGTCACTG CGCACCAGGCGTTCCTGACCCGCGAAGCCCTGGCGGCCATCGCCGAGACCACCTTGCACAACATCGCCAGCTGGGCAGCT GGCCAGCCGCAGAACCGGGTCCACGGCTGA Protein sequence : MRTILFSSQNYDRESFLGAQLPAGIELQFQAARLSLDTAALAERHEVVCAFINDDLSAPVLEQLAAGGTRLIALRSAGYN HVDLSAAQRLGLDVVRVPAYSPHAVAEHAVALILALNRRLHRAYNRTREGDFTLHGLTGFDLVGKTVGIVGTGQIGATFA RIMAGFGCQLLAYDPFPNPAVEALGARYLDLPELLAQSQIISLHCPLTEDSRYLINQQSLAHMQPGAMLINTGRGGLVDT PALIEALKSGQLGYLGLDVYEEEAQLFFEDRSDLPLQDDVLARLLTFPNVIVTAHQAFLTREALAAIAETTLHNIASWAA GQPQNRVHG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EF2295 | NP_815952.1 | D-specific alpha-keto acid dehydrogenase | Not tested | Not named | Protein | 6e-43 | 41 |
| vanHB | YP_008394258.1 | VanH protein, D-specific alpha-keto acid dehydrogenase | Not tested | Not named | Protein | 2e-43 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ldhA | YP_261540.1 | D-lactate dehydrogenase | AF310956.2.orf4.gene | Protein | 3e-44 | 42 |
