Gene Information

Name : PFL_4031 (PFL_4031)
Accession : YP_261128.1
Strain : Pseudomonas protegens Pf-5
Genome accession: NC_004129
Putative virulence/resistance : Virulence
Product : DNA-binding protein
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 4646924 - 4647121 bp
Length : 198 bp
Strand : +
Note : identified by match to protein family HMM PF01381

DNA sequence :
ATGAACAACCAACTGCGCGAACTGCGCACCCGGCAAGGCTGGTCCCAGGCCGAACTGGCCACCCGCCTCGAGGTGTCACG
GCAGACGGTGAATGCCATCGAGACCGGGCGCTACGACCCCAGCCTGCCCCTGGCGTTCAAGATTGCCCGGGCCTTCGAGA
TGCCCATCGAAAGCATTTTCAGCCCCGACGAGGACTGA

Protein sequence :
MNNQLRELRTRQGWSQAELATRLEVSRQTVNAIETGRYDPSLPLAFKIARAFEMPIESIFSPDED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 2e-08 54
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 2e-08 54
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 8e-11 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PFL_4031 YP_261128.1 DNA-binding protein VFG2168 Protein 7e-09 54
PFL_4031 YP_261128.1 DNA-binding protein VFG2175 Protein 7e-09 54