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Name : serS (PFL_3876) Accession : YP_260976.1 Strain : Pseudomonas protegens Pf-5 Genome accession: NC_004129 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 4473766 - 4475046 bp Length : 1281 bp Strand : - Note : identified by similarity to SP:P09156; match to protein family HMM PF00587; match to protein family HMM PF02403; match to protein family HMM TIGR00414 DNA sequence : ATGCTCGATTCCAAACTGTTACGTAGCAACCTCCAGGACGTAGCGGATCGTCTGGCATCCCGCGGCTTTGCCCTGGATGT GGCACGCATCGAAGCGCTGGAAGAACAGCGCAAGACCGTGCAGACCCGCACCGAGCAACTGCAGGCTGAACGTAACGCGC GCTCCAAGTCCATCGGCCAGGCCAAGCAACGCGGCGAAGACATCGCCCCGCTGATGGCCGACGTTGAGCGCATGGGGAAC GAGCTGAGCTCCGGCAAGGCGGAGCTGGAAAACATCCAGAGCGAACTGGATTCGATCCTGTTCGGCATTCCCAACCTGCC CCACGAGTCGGTGCCGGTGGGCGAAGATGAAGACGGCAACGTTGAAGTGCGCCGCTGGGGCACCCCGACCGCCTTCGATT TCCCGATCAAGGACCACGTGGCCCTGGGCGAAACCCACGGCTGGCTGGACTTTGAAACCGCCGCCAAGCTGTCCGGCGCG CGTTTTGCCCTGTTGCGCGGCCCGATCGCCCGTCTGCACCGCGCCCTGGCGCAGTTCATGATCAACCTGCACACCGGCGA GCACGGCTACGAAGAGGCCTACACCCCGTACCTGGTGCAGGCGCCGGCCCTGGTGGGTACCAGCCAGCTGCCGAAGTTCG AGGAAGACCTGTTCAAGATCACTCGCGAAGGCGAAGCCGATCTGTACCTGATCCCGACCGCCGAAGTGTCCCTGACCAAC ATCGTCGCTGGCGAGATTCTCGACGCCAAGCAACTGCCGCTGAAGTTCGTCGCCCATACGCCGTGCTTCCGTAGTGAAGC CGGTGCTTCGGGTCGCGATACCCGCGGCATGATCCGCCAGCACCAGTTCGACAAGGTCGAGATGGTCCAGGTGGTCGAGC CGTCGACCTCCATGGAAGCCCTGGAAGGCCTGACCGCCAACGCCGAGAAAGTCCTGCAACTGCTGCAACTGCCGTACCGC GTACTGGCCCTGTGCACCGGCGACATGGGCTTCAGTGCGGTCAAGACCTACGACCTGGAAGTCTGGGTACCGAGCCAGGA CAAGTACCGCGAGATCTCCTCGTGCTCCAACTGTGGCGATTTCCAGGCCCGCCGCATGCAGGCGCGCTTCCGCAACCCGG AAACCGGCAAGCCGGAGCTGGTGCACACCCTCAACGGTTCCGGCCTGGCCGTGGGCCGCACCCTGGTGGCGGTGCTGGAG AACTACCAGCAGGCCGACGGTTCGATCCGTGTGCCGGATGTGCTGAAGCCGTACATGGGTGGCCTTGAGGTCATCGGCTA A Protein sequence : MLDSKLLRSNLQDVADRLASRGFALDVARIEALEEQRKTVQTRTEQLQAERNARSKSIGQAKQRGEDIAPLMADVERMGN ELSSGKAELENIQSELDSILFGIPNLPHESVPVGEDEDGNVEVRRWGTPTAFDFPIKDHVALGETHGWLDFETAAKLSGA RFALLRGPIARLHRALAQFMINLHTGEHGYEEAYTPYLVQAPALVGTSQLPKFEEDLFKITREGEADLYLIPTAEVSLTN IVAGEILDAKQLPLKFVAHTPCFRSEAGASGRDTRGMIRQHQFDKVEMVQVVEPSTSMEALEGLTANAEKVLQLLQLPYR VLALCTGDMGFSAVKTYDLEVWVPSQDKYREISSCSNCGDFQARRMQARFRNPETGKPELVHTLNGSGLAVGRTLVAVLE NYQQADGSIRVPDVLKPYMGGLEVIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 5e-107 | 54 |
