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Name : glnA_2 (PFL_0386) Accession : YP_257530.1 Strain : Pseudomonas protegens Pf-5 Genome accession: NC_004129 Putative virulence/resistance : Virulence Product : glutamine synthetase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0174 EC number : 6.3.1.2 Position : 439104 - 440510 bp Length : 1407 bp Strand : - Note : identified by similarity to SP:P0A9C5; match to protein family HMM PF00120; match to protein family HMM PF03951; match to protein family HMM TIGR00653 DNA sequence : ATGTCGAAGTCGGTTCAACTCATCAAAGATCATGACGTCAAATGGATTGATCTGCGCTTCACTGACACCAAGGGCACTCA ACATCACGTGACCATGCCGGCTCGTGATGCGCTGGATGAAGACTTCTTCGAAGCTGGCAAGATGTTCGACGGCTCCTCCA TCGCTGGCTGGAAAGGCATCGAAGCCTCCGACATGATCCTGATGCCGGACGACGAAACCGCCGTACTGGACCCGTTCACC GAAGAACCGACCCTGATCCTGGTGTGCGACATCATCGAGCCTTCGAGCATGCAGGGTTACGATCGTGACCCACGTGCCAT CGCCAAGCGCGCCGAAGAGCACCTGAAAGCCACCGGTATCGGCGACACCGTATTCGCCGGCCCAGAGCCAGAGTTCTTCA TCTTCGACCAGGTGAAATTCAAGTCCGACATCTCCGGCTCCATGTTCAAGATCTACTCCGAACAAGGTTCGTGGATGTCC GACCAGGACATCGAAGGCGGTAACAAGGGCCACCGTCCAGGCGTCAAGGGCGGCTACTTCCCGGTTCCACCGTTCGACCA CGACCACGAAATCCGTACCTCCATGTGCAACGCACTGGAAGAAATGGGCCTGACCGTCGAAGTTCACCACCACGAAGTGG CGACTGCCGGCCAGAACGAAATCGGCGTCAAGTTCAACACCCTGGTGAAGAAGGCCGACGAAACCCAGACCCTGAAGTAC GTGGTGCACAACGTGGCTGACGCCTACGGCCGCACTGCCACCTTCATGCCCAAGCCTCTGTACGGCGACAACGGCTCGGG CATGCACGTCCACATGTCGATCTGGAAAGACGGCAAGAACACCTTCGCAGGTGAAGGCTATGCCGGCCTGTCCGATACCG CCCTGTACTTCATCGGCGGCATCATCAAGCACGGTAAGGCCCTGAACGGCTTCACCAACCCGGCGACCAACTCCTACAAG CGTCTGGTGCCAGGCTTCGAAGCCCCGGTCATGCTGGCCTACTCGGCGCGCAACCGTTCCGCTTCGATCCGTATTCCTTA CGTGTCGAGCCCTAAGGCCCGCCGTATCGAAGCCCGTTTCCCGGACCCGGCTGCCAACCCGTACCTGGCCTTCGCTGCCC TGCTGATGGCCGGCCTGGACGGTATCCAGAACAAGATCCACCCTGGCGACGCTGCTGACAAAAACCTGTACGACCTGCCG CCTGAAGAGGCCAAAGAGATCCCACAAGTTTGCGGCAGCCTGAAGGAAGCCCTGGAAGAGCTGGACAAAGGTCGTGCGTT CCTGACCAAAGGCGGCGTTTTCAGCGACGACTTCATCGACGCCTACATCGCCCTGAAAAGCGAAGAAGAAATCAAGGTAC GTACCTTCGTACACCCACTGGAATACGAGCTGTACTACAGCTGCTGA Protein sequence : MSKSVQLIKDHDVKWIDLRFTDTKGTQHHVTMPARDALDEDFFEAGKMFDGSSIAGWKGIEASDMILMPDDETAVLDPFT EEPTLILVCDIIEPSSMQGYDRDPRAIAKRAEEHLKATGIGDTVFAGPEPEFFIFDQVKFKSDISGSMFKIYSEQGSWMS DQDIEGGNKGHRPGVKGGYFPVPPFDHDHEIRTSMCNALEEMGLTVEVHHHEVATAGQNEIGVKFNTLVKKADETQTLKY VVHNVADAYGRTATFMPKPLYGDNGSGMHVHMSIWKDGKNTFAGEGYAGLSDTALYFIGGIIKHGKALNGFTNPATNSYK RLVPGFEAPVMLAYSARNRSASIRIPYVSSPKARRIEARFPDPAANPYLAFAALLMAGLDGIQNKIHPGDAADKNLYDLP PEEAKEIPQVCGSLKEALEELDKGRAFLTKGGVFSDDFIDAYIALKSEEEIKVRTFVHPLEYELYYSC |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glnA | YP_003728749.1 | glutamine synthetase | Not tested | cag PAI | Protein | 5e-109 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| glnA_2 | YP_257530.1 | glutamine synthetase | VFG1399 | Protein | 1e-104 | 50 |
