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Name : mdeA (PFL_3814) Accession : YP_260914.1 Strain : Pseudomonas protegens Pf-5 Genome accession: NC_004129 Putative virulence/resistance : Unknown Product : cystathionine gamma-synthase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0626 EC number : 4.4.1.11 Position : 4413688 - 4414962 bp Length : 1275 bp Strand : - Note : identified by similarity to GB:CAA04124.1; match to protein family HMM PF01053; match to protein family HMM PF01212 DNA sequence : ATGAATAAAAAACCTGAACGCACAGGGCTGGAAAACCCCGGGACCGCTACCCGGGTGGTCTGGGGCGGAGAGCAAGTCCG TCATCCCTACAACGCCACGCAACCCCCGATTGTCGCCAGCGCCGCCTATGGCTACGACGACATCGACCAGTGGTACGACG TGGCCCTGGGCAAGGCCCCGGGCTTTATCTACAGCCGCATGAGCAACCCCACGGTGCAAACCCTGGAAGCCAAGCTGCAG GATCTGGAAAACGCCGAATCGGCGGTGGCCTTCAGCAGCGGCATGGCAGCCATCAGCGGCGTGCTCTACAGCTTCCTGCG CCACGGCCAGCGGGTGGTGTCGACCAAGGACAGCTACGGTGGTACCAACAAGATCTTCGAGGAATTCCTGCCGCGCATGG GCGTGGCCGTGACCCTCTGCGAAACCTTCGACCAGCAGCAGATCGAGGCCGAGATCGCCAAGGGCTGCGACCTGCTGTAC CTGGAGACGCCGACCAACCCGACCCTGAAGATCGTCGATATCCAGCGTCTGGTCGCCGCGGCGAAACAGGTCGGCGCCCT GGTGGTGGCGGACAACACCTTCGCTACGCCGCTGAACCAGAACCCCCTGGCGCTGGGCGTGGATGTGGTGATCCACAGCG CTACCAAGTTCCTCAGCGGTCACGGCGATGTGCTTGGTGGCGTGGCCTGCGGCAGCGAAGCGCTGATGAGCCAGGTGCGT CACTACCGGGAAATCAACGGTGCCAGCCTCGATCCGTTCTCGGCCTACCTGATCATTCGCGGGATCAAGACCCTGGCGCT GCGCATGCGCCAGCAACAGCACAGCGCCGCGCAGCTGGCGCAGTTCCTGCTCAACGAGCCGTTGGTAGAAGCCGTGAACT ACCCGGGCCTGCCCAACCACCCGAACCACGCCGTGGCCTGTGCGCAGATGCGCGGTTTCGGCGCCATCGTCAGCTTTGTC CTGGTGGGTGGCATGGACAGCGTCAAGCAGCTGTTGCCACGCCTGCGCTATGCCCACTGCGCCGGCAACCTGGGGGCGGT GGAAACCATCTACGGCCCGGCGCGCACTACCAGCCATGTGGAAAACACCCTGGAAGAGCGCCAGGCCCTGGGCATTTCCG AAGGCCTGGTGCGGATTTCGGTGGGCATCGAAGACACCGATGACCTGCTGGCCGACCTGCAGCAGGCCTTCGCCTGGCTG CGCCAATCCCTCAAGCAGAATGCGGCGCCTGGCGCCATCCCATCCCAGGACCCGCGGGCCGAGGTCGCCCACTGA Protein sequence : MNKKPERTGLENPGTATRVVWGGEQVRHPYNATQPPIVASAAYGYDDIDQWYDVALGKAPGFIYSRMSNPTVQTLEAKLQ DLENAESAVAFSSGMAAISGVLYSFLRHGQRVVSTKDSYGGTNKIFEEFLPRMGVAVTLCETFDQQQIEAEIAKGCDLLY LETPTNPTLKIVDIQRLVAAAKQVGALVVADNTFATPLNQNPLALGVDVVIHSATKFLSGHGDVLGGVACGSEALMSQVR HYREINGASLDPFSAYLIIRGIKTLALRMRQQQHSAAQLAQFLLNEPLVEAVNYPGLPNHPNHAVACAQMRGFGAIVSFV LVGGMDSVKQLLPRLRYAHCAGNLGAVETIYGPARTTSHVENTLEERQALGISEGLVRISVGIEDTDDLLADLQQAFAWL RQSLKQNAAPGAIPSQDPRAEVAH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| metB | YP_281510.1 | cystathionine beta-lyase | Not tested | Not named | Protein | 5e-47 | 42 |
