Gene Information

Name : rpmJ (PFL_3806)
Accession : YP_260906.1
Strain : Pseudomonas protegens Pf-5
Genome accession: NC_004129
Putative virulence/resistance : Unknown
Product : 50S ribosomal protein L36
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0257
EC number : -
Position : 4404770 - 4404919 bp
Length : 150 bp
Strand : -
Note : identified by match to protein family HMM PF00444; match to protein family HMM TIGR01022

DNA sequence :
ATGAAAGTCCTGTCGTCCCTCAAAGAAGCCAAGAATCGTCACCGCGACTGCCAGATCGTCAAGCGTCGCGGTCGCATCTA
TGTGATCTGCAAATCCAATCCGCGCTTCAAGGCTCGCCAGGGCGGGGCGAAGAACCGGAACAAGGGGTGA

Protein sequence :
MKVLSSLKEAKNRHRDCQIVKRRGRIYVICKSNPRFKARQGGAKNRNKG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rpmJ YP_001800879.1 50S ribosomal protein L36 Not tested Not named Protein 3e-05 57