Gene Information

Name : PFL_3796 (PFL_3796)
Accession : YP_260896.1
Strain : Pseudomonas protegens Pf-5
Genome accession: NC_004129
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG2135
EC number : -
Position : 4396430 - 4397113 bp
Length : 684 bp
Strand : +
Note : identified by match to protein family HMM PF02586

DNA sequence :
ATGTGTGGAAGACTCTCTCAGTACCGCGGCATCCATGACTTCGTCGCAGCCCTGAGCATGCCCGGGGCCCTGATCAATAA
CGTCGGTGATCAGCCCCTGGGGCGCTACAACGCGGCGCCGACGATGCAGCTAGCCCTCTTCCACGTCGCCGAAGACAAAC
TACACGCCGACGCCGTGCGCTGGGGTTGGAGGCCACATTGGGCCACCGACCGCGCCGCGCCGATCAATGCCAGGGTCGAG
AAAGTGGCTCACGGGCCGTTCTTCCGCCAGATCTGGCCGCACCGGGCCATATGCCCGATCGATAACTGGTTTGAATGGGT
GGACGAAGGCGGACCTAAGAAACAGCCCTACTTGATCAAGCACCGCAACGGCTCCCCCATCCTCTGCGCCTCAATCGGAC
AGTTGCCTGGCCACGACCGAAGCGAGCACGAAGGCTTTGTGATCATCACAGCGGATAGCGAAGGGGGAATGGTCGACACC
CACGACCGCCGGCCTGTGGTCCTTGCACCAGACCTGGCCCGGGTATGGCTCGATCCGGCAACGCCGAAGGAACGCGCCGA
ACAGATGGCGTTACACCAAGGCGAATCGGCCAACTCCTTCAAGTGGTTCAGGGTATGCACCGCGGTCGGAAACGTGCGGA
ATCATGGGCCGGAACTGATCGAGCCATTGGTGACGCCGCCATAA

Protein sequence :
MCGRLSQYRGIHDFVAALSMPGALINNVGDQPLGRYNAAPTMQLALFHVAEDKLHADAVRWGWRPHWATDRAAPINARVE
KVAHGPFFRQIWPHRAICPIDNWFEWVDEGGPKKQPYLIKHRNGSPILCASIGQLPGHDRSEHEGFVIITADSEGGMVDT
HDRRPVVLAPDLARVWLDPATPKERAEQMALHQGESANSFKWFRVCTAVGNVRNHGPELIEPLVTPP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13389.1 hypothetical protein Not tested PAGI-5 Protein 1e-65 59
pph98 CAI36139.1 hypothetical protein Not tested PPHGI-1 Protein 2e-44 45