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Name : PFL_3636 (PFL_3636) Accession : YP_260738.1 Strain : Pseudomonas protegens Pf-5 Genome accession: NC_004129 Putative virulence/resistance : Unknown Product : response regulator/EAL domain-containing protein Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG2200 EC number : - Position : 4200341 - 4201615 bp Length : 1275 bp Strand : + Note : identified by match to protein family HMM PF00072; match to protein family HMM PF00563 DNA sequence : ATGCTCAAGCCCCTGCGAGTCCTGGTGCTGGACGACCATCCGATCCACTGCCTGCAGGCCCGGCACCTGTTGCAGGCGGC CGGGTTCGGCCGGGTGGACAGCGCCCTCGATGCGCGCCAGGCCCTGGCCATGCTGCACCGCCAGGTCTACGACCTGGTGC TGGTGGACCTGCACATGCCGGAAATGGATGGAGTGCAGTTCATCCATGCCCTGACCGGTGTCGACCAGGTGCCGATCCTG GCCATCGTCTCGTCCTGCTCGCGGCGGTTGATGAACAGCGTCAGCCTGATGGCCAAGGAGAAGGGCCTGGCGGTACTCGG CACCTTCCCCAAGCCCCTGGAAGCGATCCACGTCGAGCAGATCAGCGCCATCATCGGCAACAGCCAGGACCCGGTGCTGG CAGCCCGGCCCGAGCACGAGGCAGTGTTCGACCGCCAGGTCCTGGAGCGGGCCATCGAACGCCGCGAGCTCAAGGCCCGG TTCCAGCCCCGGCGCTCGCTGAGCACTGGCCGGATCGTCGGCGCCGAGGCCCTGGTGCGCTGGAACAGTCCGTCCTTCGG GCTGCTGATGCCGGACTCGTTCCTTGCCTCCATCAGCCGCTGCCAGCTGGACCATGCGCTGTTGCTGCTGATGCTCGACG ACGCCCTCCAGGCGCAGCAGCACTGGCAACGCCTGGGCCACCGCCTCAGCGTATCGGTGAACCTGCCCACCGGACTGCTG GACGACCCCGGCCTGCCCGACCAGTTGCAGCAGATCACCCTCGCCTCGGGGCTGGCCACCAGCGATATCTGCTTCGAGCT GCTGGAAACCGAGCGGCCACTGTCCCCCGGGCAGTATCATATGGGCGCCAGCCGCCTGCGCCTCAAAGGCTTCGGCCTGG CACAGGACGACTTCGGCATGGGCTACAGTTCCATGTACAGCCTGATCTCCACGCCCTTTACCGAGATGAAGATCGACCGC CACTTCGTGCATGGCGCCGCAGCCGACGATGCCCGCGCCGCAGCCCTGGTGGCGGCGGTGCAACTGGGCCGGCAACTGGG CCTGGAAGTGGTGGCCGAGGGCGTGGAATCGGCCCGTGACCTGGAATTTCTGCGCCAGATTGGCTGCGACAGTGCCCAGG GGTATCTTATTTCCGCCGCATTGGAGCTGGACGCCTTCACACAACTGCTGGGATGCACTGTTACTCCACCCTTTTCGTCA CCTACCCGGCCTGCCTCCTCTCTCCCATGCCAGACATCCCGCTACGCCGCATCGCGAAAAACTTCCGACGATTGA Protein sequence : MLKPLRVLVLDDHPIHCLQARHLLQAAGFGRVDSALDARQALAMLHRQVYDLVLVDLHMPEMDGVQFIHALTGVDQVPIL AIVSSCSRRLMNSVSLMAKEKGLAVLGTFPKPLEAIHVEQISAIIGNSQDPVLAARPEHEAVFDRQVLERAIERRELKAR FQPRRSLSTGRIVGAEALVRWNSPSFGLLMPDSFLASISRCQLDHALLLLMLDDALQAQQHWQRLGHRLSVSVNLPTGLL DDPGLPDQLQQITLASGLATSDICFELLETERPLSPGQYHMGASRLRLKGFGLAQDDFGMGYSSMYSLISTPFTEMKIDR HFVHGAAADDARAAALVAAVQLGRQLGLEVVAEGVESARDLEFLRQIGCDSAQGYLISAALELDAFTQLLGCTVTPPFSS PTRPASSLPCQTSRYAASRKTSDD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pvrR | AAP84164.1 | PvrR | Not tested | PAPI-1 | Protein | 4e-52 | 44 |
