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Name : gacA (PFL_3563) Accession : YP_260665.1 Strain : Pseudomonas protegens Pf-5 Genome accession: NC_004129 Putative virulence/resistance : Virulence Product : response regulator GacA Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG2197 EC number : - Position : 4110513 - 4111154 bp Length : 642 bp Strand : - Note : See Laville et al 1992 (PMID: 1311842) for more information.; identified by match to protein family HMM PF00072; match to protein family HMM PF00196 DNA sequence : TTGATAAGGGTGCTAGTAGTCGATGACCATGATCTCGTTCGTACGGGCATTACACGAATGTTGGCTGACATCGATGGCCT GCAAGTAGTCGGGCAGGCGGAGTCAGGGGAAGAATCCCTGCTCAAGGCGCGGGAGCTGAAGCCCGATGTGGTCCTGATGG ACGTCAAGATGCCAGGCATCGGCGGCCTCGAAGCCACGCGCAAACTGCTGCGCAGTCATCCGGACATCAAGGTCGTGGCG GTCACCGTCTGCGAGGAAGATCCCTTTCCTACCCGCTTGCTGCAAGCGGGTGCGGCGGGCTATCTGACCAAGGGCGCCGG TCTGAACGAAATGGTCCAGGCCATCCGCCTGGTATTTGCCGGCCAGCGCTATATCAGCCCGCAGATCGCTCAGCAATTGG TGTTCAAGTCATTCCAGCCTTCCAGTGATTCACCGTTCGACGCCCTGTCGGAACGGGAGATCCAGATTGCGCTGATGATT GTCGGCTGCCAGAAGGTGCAGATCATCTCCGACAAGCTGTGCCTGTCGCCGAAAACCGTGAATACCTACCGCTATCGCAT TTTCGAGAAGCTCTCGATCAGCAGCGATGTCGAGTTGACGCTATTGGCGGTTCGTCACGGCATGGTTGATGCCAGCCTCT GA Protein sequence : MIRVLVVDDHDLVRTGITRMLADIDGLQVVGQAESGEESLLKARELKPDVVLMDVKMPGIGGLEATRKLLRSHPDIKVVA VTVCEEDPFPTRLLQAGAAGYLTKGAGLNEMVQAIRLVFAGQRYISPQIAQQLVFKSFQPSSDSPFDALSEREIQIALMI VGCQKVQIISDKLCLSPKTVNTYRYRIFEKLSISSDVELTLLAVRHGMVDASL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00302 | YP_008207767.1 | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | Not tested | AbaR25 | Protein | 1e-51 | 57 |
| BJAB0868_00306 | YP_008211632.1 | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | Not tested | AbaR26 | Protein | 1e-51 | 57 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gacA | YP_260665.1 | response regulator GacA | VFG1889 | Protein | 2e-50 | 56 |
