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Name : PFL_3380 (PFL_3380) Accession : YP_260485.2 Strain : Pseudomonas protegens Pf-5 Genome accession: NC_004129 Putative virulence/resistance : Unknown Product : major facilitator family transporter Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2271 EC number : - Position : 3902009 - 3903319 bp Length : 1311 bp Strand : + Note : identified by match to protein family HMM PF07690 DNA sequence : ATGTCACAGAGCGCCGCTGCCCCACTGGCCCAGGCTGACGACAAGAACGCCGTCTACAAGCGCATCACCCTGCGCCTGAT CCCCTTCATCTTCGTCTGCTACCTGTTCAACTACCTCGACCGGGTCAACGTTGGCTTCGCCAAGTTGCAGATGCTCGATG CCCTGAAATTCAGCGAAACGGTCTACGGCCTGGGTGCCGGGATTTTCTTCATCGGCTACGTGCTGTGCGGCGTGCCGAGC AACCTGGCACTGAACCGGTTCGGCCCGCGGCGCTGGATCGCGCTGATGATGATCACCTGGGGCACCTTGTCCACCTGCCT GCTGTTCGTCACCACGCCGACCCAGTTCTACACCCTGCGCCTGTTCACCGGGGCCGCCGAAGCCGGCTTCTTCCCCGGCG TGGTGCTGTACCTCTCGCAGTGGTTCCCGACCTTCCGCCGTGGCCGGATCATGGCCCTGTTCATGTCGGCGATCCCGGTG TCCGGCCTGCTGGGCAGCCCGTTTTCCGGCTGGATCCTCAACCACTTCGCCGCCGGCCAGGGCGGCCTCGCCGGCTGGCA GTGGATGTTCCTGCTGCAGGGCATTCCTACCGTGATCCTCGGCGCCCTGGCGTTCTTCCTGCTCAGCGACAGCTTCGCCC ATGCCAAGTGGCTGACCCCGACTGAACGCGCAGTGCTGGAGGCCGACCAGGCCAGCGACCTCGCCAACCAGCCCAAGACC GCCAGCGACTCCCTGGCCGCGGTGTTCAAGAACCCGGCGATCTGGGCCTTCGGCCTGATCTACTTCTGCATCCAGAGCGG GGTCTACGCGATCAACTTCTGGCTGCCGTCGATCATCAAGAACCTGGGGTTTGCCGACAATCTGGTGATCGGCTGGCTGA GCGCCATTCCCTACCTGCTGGCGGCGGTGTTCATGCTGCTGGTGGGGCGCTCGGCGGACCTGCGCAAGGAGCGCCGCTGG CACCTTGTAGTGCCGATGTTGATGGGCGCCGTGGGGCTGCTGATCGCGGTTAACTTCGCCGCCAACCCGGCCATCGCCAT TCTCGGCCTGACCCTCGCCACCATGGGTGCCCTCACCGGCCTGCCGATGTTCTGGCCGGTGCCCACTGCCCTGCTCAGCG CCGGTGCAGCTGCCGGTGGCCTGGCGCTGATCAACTCCATGGGCCAGATGGCCGGGTTCCTCAGCCCCTATATCGTCGGC TGGGTCAAGGACAGCACCGGTTCCACCGACGCCGCGCTGTACCTGCTGGCCGGGGTAATTGTTGCCGGCAGCCTGCTGGC GCTGCGCATGACCCGCACCCTGAACCGCTAA Protein sequence : MSQSAAAPLAQADDKNAVYKRITLRLIPFIFVCYLFNYLDRVNVGFAKLQMLDALKFSETVYGLGAGIFFIGYVLCGVPS NLALNRFGPRRWIALMMITWGTLSTCLLFVTTPTQFYTLRLFTGAAEAGFFPGVVLYLSQWFPTFRRGRIMALFMSAIPV SGLLGSPFSGWILNHFAAGQGGLAGWQWMFLLQGIPTVILGALAFFLLSDSFAHAKWLTPTERAVLEADQASDLANQPKT ASDSLAAVFKNPAIWAFGLIYFCIQSGVYAINFWLPSIIKNLGFADNLVIGWLSAIPYLLAAVFMLLVGRSADLRKERRW HLVVPMLMGAVGLLIAVNFAANPAIAILGLTLATMGALTGLPMFWPVPTALLSAGAAAGGLALINSMGQMAGFLSPYIVG WVKDSTGSTDAALYLLAGVIVAGSLLALRMTRTLNR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAT96055.1 | major facilitator family transporter | Not tested | T-PAI | Protein | 6e-86 | 50 |
| unnamed | AAT96099.1 | major facilitator family transporter | Not tested | T-PAI | Protein | 6e-86 | 50 |
| unnamed | AAT96228.1 | major facilitator family transporter | Not tested | T-PAI | Protein | 6e-86 | 50 |
| unnamed | AAT96176.1 | major facilitator family transporter | Not tested | T-PAI | Protein | 3e-86 | 50 |
| unnamed | AAT96116.1 | major facilitator family transporter | Not tested | T-PAI | Protein | 2e-86 | 50 |
