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Name : PFL_3375 (PFL_3375) Accession : YP_260480.2 Strain : Pseudomonas protegens Pf-5 Genome accession: NC_004129 Putative virulence/resistance : Unknown Product : major facilitator family transporter Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2271 EC number : - Position : 3896063 - 3897370 bp Length : 1308 bp Strand : + Note : identified by match to protein family HMM PF07690 DNA sequence : ATGCCCCACTCAACCCTTGCCACGGCGCCGGTCGCCGAGGTCGATGACTGCTATCGCAAGATCACCTGGCGGCTGATGCC GCTGTTGTTCGTCTGCTACATCTTTGCTCACCTGGATCGCATCAACATCGGTTTCGCCAAGCTGCAGATGACCCAGGACC TGGGCTTCAGCGACAGCGTCTATGGCCTGGGTGCCGGGCTGTTCTTCGTCGCCTACGCGCTGTTCGGGGTGCCCAGCAAC CTGGCCCTGGACCGGGTCGGCCCACGGCGCTGGATCGCCTTCCTGATGCTGGTCTGGGGCCTGCTGTCCAGCGCCCTGAT GCTGGTGGACAGCGCCTGGGGCTTCTATGTTTTGCGCTTTCTGCTGGGGGTCGCCGAGGCCGGCTTCTTCCCCGGCATCC TGGTGCTGCTCAACCGCTGGTTCCCGGCCAGCCGCCGCGGCCAGGTCACCGCCCTGTTCGCCATCGCCGTGCCCATGGCC GGAGTCATTGGCGGCCCCCTCTCCGGGTGGATCCTGGAAAGCTTCCACGACTTCGGCGGCCTGCGCGGCTGGCAGTGGAT GTTCCTCATCGAAGGCCTGCCGGTGGTGCTGCTGGGCCTGGTGGTGCTCAAGGCCCTGCCGGAAAGCATCGAACAGGTGG GCTGGCTGACCCCGGCGCAGAAGACCTGGCTGCTGCAGGCCCTGCAACAGGAAGAACAGCACAAGTCCATCACCCGTTTC AGCGGCATCCTCAGGGACCGCCACGTCTGGCTGCTGGTGTGCATCTACTTCGCGGTGATGCTGGCGGTGAACACCATCGC CTTCTGGATGCCGACCCTGATCCACCACGCCGGCATCGCCCGGGACAGCAATGTCGGCCTGCTCAGTGCCCTGCCCTACC TGGCAGGCTGCCTATTCATGCTCGGCGTCGGCCGCTCCTCGGACCGCCTGCGCGAACGCCGCTGGCACCTGGGGGTGCCG CTGCTGATGTCCAGCCTGGGGCTGATCCTCACCGGGCTGGCCCCGGACAACCCCTGGCTGGTGATGTTCGGCCTGCTGGT GGCGGGCATGGGCGCCAGCGCCGCCTTGCCGATGTTCTGGCAACTGCCGCCGGCCTTTCTCGCCAGCAGCACCCAGGCCG CGGGTATCGCCCTGATCAGTTCCTTCGGCAGCGTCGCCGCGTTCCTTGCCCCTTACCTGATCGGCGTGGTGCGCGACGCC ACCCAAAGCGCCAGCCTGGCCCTCTACGCCCTGGCCCTGCTGATTGCCTGCGGCGCCTGGCTGGTGCTCCAGGTGCCGGC TCATATCGTCAACCCTCGGGAGAAATAA Protein sequence : MPHSTLATAPVAEVDDCYRKITWRLMPLLFVCYIFAHLDRINIGFAKLQMTQDLGFSDSVYGLGAGLFFVAYALFGVPSN LALDRVGPRRWIAFLMLVWGLLSSALMLVDSAWGFYVLRFLLGVAEAGFFPGILVLLNRWFPASRRGQVTALFAIAVPMA GVIGGPLSGWILESFHDFGGLRGWQWMFLIEGLPVVLLGLVVLKALPESIEQVGWLTPAQKTWLLQALQQEEQHKSITRF SGILRDRHVWLLVCIYFAVMLAVNTIAFWMPTLIHHAGIARDSNVGLLSALPYLAGCLFMLGVGRSSDRLRERRWHLGVP LLMSSLGLILTGLAPDNPWLVMFGLLVAGMGASAALPMFWQLPPAFLASSTQAAGIALISSFGSVAAFLAPYLIGVVRDA TQSASLALYALALLIACGAWLVLQVPAHIVNPREK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAT96176.1 | major facilitator family transporter | Not tested | T-PAI | Protein | 3e-90 | 47 |
| unnamed | AAT96116.1 | major facilitator family transporter | Not tested | T-PAI | Protein | 2e-91 | 47 |
| unnamed | AAT96055.1 | major facilitator family transporter | Not tested | T-PAI | Protein | 4e-90 | 47 |
| unnamed | AAT96099.1 | major facilitator family transporter | Not tested | T-PAI | Protein | 4e-90 | 47 |
| unnamed | AAT96228.1 | major facilitator family transporter | Not tested | T-PAI | Protein | 4e-90 | 47 |
