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Name : hpaE (PFL_3372) Accession : YP_260477.1 Strain : Pseudomonas protegens Pf-5 Genome accession: NC_004129 Putative virulence/resistance : Unknown Product : 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.60 Position : 3893100 - 3894560 bp Length : 1461 bp Strand : + Note : identified by similarity to SP:P42269; match to protein family HMM PF00171; match to protein family HMM TIGR02299 DNA sequence : ATGATCAAGCACTGGATCAACGGCCGCGAAGTCGAAAGCCGCGAAGTGTTCACCAACTACAACCCCGCCACCGGTGAAGC CATTGGCGAGGTGGCCAGCGGCGGCGCCGAGGAAATCGCCCAGGCGGTAGCGGCGGCCAAGGACGCCTTTCCGAAATGGG CCAATACCCCGGCATCGGTGCGCGCCCGGCTGATGCGCCGCCTGGGTGCGCTGATCGAAGAGAACGTGCCGCACCTGGCG GAGCTGGAAACCCTGGACACCGGCCTGCCGATCCACCAGACCCGCAACGTGCTGATTCCCCGGGCCTCCCACAACTTCGA TTTCTTCGCCGAGGTCTGCACCCGCATGGATGGCCACAGCTATCCGGTGGACGACCAGATGCTCAACTACACCCTGTACC AGCCGGTGGGCGTCTGCGCCCTGGTGTCGCCATGGAACGTGCCGTTCATGACCGCCACCTGGAAGACCGCGCCGTGCCTG GCCCTGGGCAATACCGCGGTGCTGAAGATGAGCGAACTGTCGCCGCTGACCGCCAATGAGCTGGGCCGGCTGGCGGTGGA AGCCGGGATTCCCGCCGGGGTGCTGAACATCGTCCAGGGCTACGGTGCCACCGCCGGCGATGCCCTGGTACGCCACCCGG ACGTGCGGGCGATTTCCTTCACCGGCGGCACCGCCACCGGCAAGAAGATCATGCAGACCGCGGGCCTGAAGAAGTACTCC ATGGAACTGGGCGGCAAGTCGCCGGTGCTGATCTTCGAGGACGCCGACCTGGAACGGGCCCTGGACGCCGCGCTGTTCAC CATCTTTTCCCTGAACGGCGAGCGCTGCACCGCCGGCAGCCGGATCTTCATCCAGGAAAGCGTCTACCCGCAGTTCGTCA AGGAGTTCGCCGCCCGGGCCAGGCGCCTGATCGTCGGTGACCCGCAGGACCCCAAGACCCAGGTCGGCTCGATGATCACC CAGGCCCACTACGACAAGGTCACCGGCTATATCCGCATCGGCCTGGAAGAAGGCGCGACCCTGCTGGCCGGCGGCCTGGA GCGCCCGGCCAACCTGCCGGCGCACCTGGCCCGCGGGCAGTTCATCCAGCCCACGGTGTTCGCCGACGTGGACAACCAGA TGCGCATCGCCCAGGAAGAGATCTTCGGCCCGGTGGTGTGCCTGATCCCGTTCAAGGACGAGGCCCAGGCCCTGCAACTG GCCAACGACACCGAGTACGGCCTGGCCTCCTACATCTGGACCCAGGACATCGGCAAGGCCCATCGCCTGGCCCGTGGCAT CGAGGCCGGCATGGTGTTCATCAACAGCCAGAACGTGCGCGACCTGCGCCAGCCCTTCGGCGGCATCAAGGGTTCGGGCA CCGGTCGCGAAGGCGGCGAATACAGCTTCGAGGTCTTTGCCGAGATCAAGAACGTCTGCCTCTCCATGGGCAGCCACCAC ATACCGCGCTGGGGCGTGTAA Protein sequence : MIKHWINGREVESREVFTNYNPATGEAIGEVASGGAEEIAQAVAAAKDAFPKWANTPASVRARLMRRLGALIEENVPHLA ELETLDTGLPIHQTRNVLIPRASHNFDFFAEVCTRMDGHSYPVDDQMLNYTLYQPVGVCALVSPWNVPFMTATWKTAPCL ALGNTAVLKMSELSPLTANELGRLAVEAGIPAGVLNIVQGYGATAGDALVRHPDVRAISFTGGTATGKKIMQTAGLKKYS MELGGKSPVLIFEDADLERALDAALFTIFSLNGERCTAGSRIFIQESVYPQFVKEFAARARRLIVGDPQDPKTQVGSMIT QAHYDKVTGYIRIGLEEGATLLAGGLERPANLPAHLARGQFIQPTVFADVDNQMRIAQEEIFGPVVCLIPFKDEAQALQL ANDTEYGLASYIWTQDIGKAHRLARGIEAGMVFINSQNVRDLRQPFGGIKGSGTGREGGEYSFEVFAEIKNVCLSMGSHH IPRWGV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hpaE | AAO17179.1 | HpaE | Not tested | tcd island | Protein | 2e-172 | 78 |
| ORF SG19 | AAN62241.1 | putative aldehyde dehydrogenase | Not tested | PAGI-3(SG) | Protein | 1e-64 | 42 |
