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Name : styD (PFL_3217) Accession : YP_260322.1 Strain : Pseudomonas protegens Pf-5 Genome accession: NC_004129 Putative virulence/resistance : Virulence Product : phenylacetaldehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.39 Position : 3710604 - 3712091 bp Length : 1488 bp Strand : - Note : identified by similarity to SP:P80668; match to protein family HMM PF00171 DNA sequence : ATGAGCGTTGCCATCGACCCACGTGTCGCTGCATTCATAGACAGTCAGCATGGCCTGCTGATCGACGGTCACAGCCAGCC GGCCCTCAGCGGTGCGCGGATGGCGGTGTACAACCCCGCCAGTGGCGAACAATTGGCCGAGGTCGCGGCAGCTGCCCAGG CCGATATCGACCTGGCGGTGAACGCCGCACGTCGGGCCTTCGAGGGTAGCTGGAAGGCGCAGCGCCCCGCCGACCGCGAG CGCCTGCTGCTGAAGCTGGCGGACCTGCTGGAAGCCAATGGCGAGGAACTGGCGCAACTGGAAACCCTCAACAACGGCCA GTCGATCCACCTGGCCCGGGCCCTGGAGGTGGGAGCGGCCGCGGAGTTCACCCGCTACATGGCCGGCTGGGCCACCAAGA TCGAGGGCAAGAGCCTGGATGTCTCCATCGCCGCAGTGCCCGGGGCGCAGTACCGGGCCTACACCGTGCCGGAGCCGGTG GGCGTGGTGGGGGCCATAGTGCCGTGGAACTTCCCGCTGCTGATGGCCATCTGGAAAATCGTTCCGGCCCTGGCCTGTGG CTGCACCGTGGTGCTCAAGCCGGCGGACGAAACCCCGCTGACCGCGTTGCGCCTGGGCCAGTTGTGCCTGGAAGCGGGGA TCGCCCCCGGGGTGGTCAACGTGGTCACCGGCAGTGGCGCCCAGGCCGGCGCGGCCCTGGCCGCGCATTCGGGAATCGAC AAGCTGGCGTTCACCGGCTCGACCCAGGTGGGCAAGCTGATCGGCCATGCCGCGGTGGACAACATGACCCGTTTTTCCCT GGAGCTGGGCGGCAAATCGCCGGTGATCGTGCTTGACGACTGCGACCCGCAGACCGCCGCCGCCGGCGCCGCCGGGGCGA TCTTCTTCAACCAGGGGCAGGTGTGCACGGCGGGTTCGCGGCTGTACATCCAGCGCCGTATCTATAACGAGGTGCTGGAG CGCCTGGTGGCCATTGCCGGGTCCCTGAGCATCGGGCCGGGGCTGGACGAGCAGGCACAGATCAATCCGCTGATTTCCGC CAAGCAGCAAAAACGCGTGCTACAGATGGTCCAGCGCGGAGTCGAAGAGGGCGCCCGGCTGCTCTGTGGCGGTGTCGCCC ATGGCGAGCGGGGCTTCTATGTGCGCCCGACAGTGGTGGCCGATGTGCACGCCGACCAGCAACTGGTGCGCGAGGAAATC TTCGGCCCGGTGGTGGTGGCCACGCCCTTCGACACCCTGGACGAAGTGGTGGGCCTGGCCAATGACAACCAGTACGGGCT GGGGGCGAGCATCTGGTCCAACGACCTGGGGCGGGTCATGCAGCTGATTCCGCAGATCAAGGCCGGCACTGTCTGGGTCA ACACCCACAACATGCTGGACCCGTCGATGCCCTTCGGTGGCTACAAGCAGTCGGGCATCGGTCGCGAGATGGGCCATGCG GCCATCGAGGCCTACACCGAGAACAAGTCGGTGTGCATCGCTTATTGA Protein sequence : MSVAIDPRVAAFIDSQHGLLIDGHSQPALSGARMAVYNPASGEQLAEVAAAAQADIDLAVNAARRAFEGSWKAQRPADRE RLLLKLADLLEANGEELAQLETLNNGQSIHLARALEVGAAAEFTRYMAGWATKIEGKSLDVSIAAVPGAQYRAYTVPEPV GVVGAIVPWNFPLLMAIWKIVPALACGCTVVLKPADETPLTALRLGQLCLEAGIAPGVVNVVTGSGAQAGAALAAHSGID KLAFTGSTQVGKLIGHAAVDNMTRFSLELGGKSPVIVLDDCDPQTAAAGAAGAIFFNQGQVCTAGSRLYIQRRIYNEVLE RLVAIAGSLSIGPGLDEQAQINPLISAKQQKRVLQMVQRGVEEGARLLCGGVAHGERGFYVRPTVVADVHADQQLVREEI FGPVVVATPFDTLDEVVGLANDNQYGLGASIWSNDLGRVMQLIPQIKAGTVWVNTHNMLDPSMPFGGYKQSGIGREMGHA AIEAYTENKSVCIAY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ORF SG19 | AAN62241.1 | putative aldehyde dehydrogenase | Not tested | PAGI-3(SG) | Protein | 1e-63 | 47 |
| hpaE | AAO17179.1 | HpaE | Not tested | tcd island | Protein | 8e-59 | 42 |
| VC0819 | NP_230467.2 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 3e-60 | 41 |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 2e-54 | 41 |
| aldA | AAK20747.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 3e-60 | 41 |
| aldA | AAK20776.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 3e-60 | 41 |
| aldA | AAC12273.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 3e-60 | 41 |
| aldA-1 | YP_001216300.1 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 4e-60 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| styD | YP_260322.1 | phenylacetaldehyde dehydrogenase | VFG0082 | Protein | 1e-60 | 41 |
