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Name : PFL_3193 (PFL_3193) Accession : YP_260298.1 Strain : Pseudomonas protegens Pf-5 Genome accession: NC_004129 Putative virulence/resistance : Unknown Product : sensor histidine kinase/response regulator Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG0642 EC number : - Position : 3672892 - 3675729 bp Length : 2838 bp Strand : + Note : identified by similarity to SP:P14376; match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518 DNA sequence : ATGAGATTAAAAAGCTACCTGCATCAGATCAATCCCCTATTTTCCAGTCCTGAAGCAGCCCGCCGGCTGCTTCGTGTCGT GGCGCTGATTTTTCTGGTCGGCCTGTTCGGCGCGGTCTACAACTTTCTTCGCTCCAGCCTGCACAACGAACTCTCACAAC GGCAAAGCTACATGAGCAGCGCCATTGCCGAGGCCCAGGCATTCTTCACCAGCCGCTCGGCCCTGTTGGAAAGCCTGAGC CTGGCGGCGGTCTACGACCCTGGGGAACATATCAGCCCCCCAGGCGCCAGCGGTGCCTCCCAAGAAGAGACGTACCTGCA ACTGGGTGGACCGCAGGGCAACCAGTGGGGGATCTGGCTGACCCTGCGCATGCGCAACTACCTGCAAAACAAGCAACTGA ACCTGCTCTACATTCCCGGCACCCGCGATCTGCAGGTGCAACGCCTGTTCAGCACCCGGCCACAGACCAGCGATCTGCCC GGCGGGTTGCTGGACAAGCTGATCGCTCTGAAGCCCGAGCAGATCCCTGTCGGCGAAGAACTTTGGCTGATGGACAACTC CGCGGCGGGCGCCCATCTGTACATCTTCACTCGCCTTGACGAACGCTTCGCCCACTCCGGCTGGCTTGGACTGGAGATGG ACGGCAAGAGCGTCTCCGCCGCCCTCAGCGACCAGAGCGCCGGGGATTTCATGATGTTCAATTCCCAGGGCGGGCTGATT TTCAGCAGTGCGCCCAGTGCCCGACTGAGCGCCGACGTACGCCACGTCCAGGGCGGCAGTTTCTTCGGCTTTCTCGGCGG CCGCTGGTGGCCCGACCATCTGGTGATCCGCAAGCAGCTGGGGGCTACCGACTGGCAGCTGGTGTACTCCTTCGACCTGC AGAACCTGCTCAAGAGCCTCTGGCCGCAGTTGCTGGCGGCGCTGCTCATCAGCCTGACCGGCATGGCTCTGATCGGCCTG CTGACCCACTGGGTCGAAGTGCGCCTGATCGCCCCCGCCCTGCACCGGATCCAGGCCCTGGTCGAAAGCGAGGCCTTCAG CCGCGACGTGATCCAGATCGCCCCGGTGGCACTCTGTGTATTGCGCCGCAGCGATGGCCGGGTGGTGCTGGAAAACACCC TGTCCCAGCAATGGCTGGGCAACGGCAGCGAACGCGACCAGCTGTGTTCCGGGTGGATCGAGCAGGCCTTCGACCCGGCC CGCCCCAACAGCTCGGACTACTTTGAAACCGCCGACGGGCGCCATCTGTACCTCAGCTCCGCCCCCACTCGCTACAACGG TGAGGACGTGCTGTTCTGCGCCTTCAGCGATATCAGCGCTCGCAAGCAGATCGAGGCGGCGCTGGAAGAAGCCAAGCGCC TGGCCGATACCGCCAATGAAGCCAAGACCCTGTTCCTGGCCACCATGAGCCACGAGATCCGCACGCCACTGTATGGCGTG CTCGGCACCCTGGAGCTGCTGTCGCGGACCCAGCTGGACAACCAGCAGAAGGATTACCTGCAAGCCATAGAAGGCTCTTC CGGTACGCTGCTGCAGTTAATCTGCGACGTGCTCGACGTGTCCAAGATCGAAGCCGGGCAACTGGCCCTGGAGCTCAGCG AATTCTCCTCCCTGGATCTGGTGCACGAGATCATCCAGGGCTACGCGGCGGCCGCCCAGGCCAAGGGCCTGCAGTTCTAT GCCTGTGTCGACCCGCAGTTGCCGGAGATCCTGCTCGGCGATGTCACCCGGATCCGCCAGATCCTCAGCAACCTGCTGAA CAACGCGGTCAAGTTCACCGATACCGGGCGCATTGTCCTGCGGGTCCGCACCGAAAGCCGCGATGGCGAGCGCAGCAACA TCCTCTGGCAGGTTTCCGACACCGGCCGGGGCATTGCCCAGGACGACCAGACACTGATCTTCGAGCCCTTCTACCAGACC GAAGGCAACACCAACGTGATCGCCGGCACCGGCCTGGGCTTGCCGATCTGCCAGCGCCTGACCCAATTGATGAACGGCAA TATCCGCATGGTCAGCGAGCTCGGCCTGGGCAGCAGCTTCACCCTGACTCTGCCGCTGGAGGCCTCTGCCGTGCAGGGCG ACACCCCGCTGATCAGCCCATTGCTGCCGGAGATGGTCTATGTCGTGTCCCCGGTGCGTGAACTGGCCGAATCGGTGGCG GGCTGGCTGCGCCGCTGGGGTGCCCGGGCCCAGTTCAGCCTGCCGAGCCCGTCCGACCGGGCCCGGGGCAACGTACTGAT CGAACTACACCCCGGCAGCGTGGAGCAGCGCCTGGAACCCGACTGGCAGGGCCCCCTGGTGCTCGCCAGCGGCGATGGCC ATAACGAACCGCGGATCGACGGCGGCAGTTGGCAGATCAACACCAACAACCTGCGGGCGATCCATCAGGCCGTCAGCCAG GCCCAGGGGGTCTGGGTGGCCCAGAGCGAGGATCACTCCGATCACCGCGAGCTGAAAAAGCTCAGCCTGCATGTCCTGGT GGCCGAAGACAACGTGATCAACCAGTTGATCCTCAAGGACCAACTGGAAGAACTGGGGTGCAGCGTGGAGCTGGCCTCGA ACGGTGAAGAGGCCCTCTGCATCTGGAAGGCCGGTCGTTTCAACGTTGTGCTGACCGATGTGAACATGCCGAAACTCAAC GGTTATGAACTGGCCCAGGAGCTTCGGCGTCAAGGCTGTTCGATCCCCATCATCGGGGCAACGGCCAATGCAATGCGCGG AGAAGAAGAGCTCTGTCTTGCAGCCGGGATGAACCACTGCCTGGTGAAGCCCTTTGCATTAAGAGCGTTGTTCAACTATC TGGCGCCCTATGAAAGAGCCCCCCATGAAGTCCTGTAG Protein sequence : MRLKSYLHQINPLFSSPEAARRLLRVVALIFLVGLFGAVYNFLRSSLHNELSQRQSYMSSAIAEAQAFFTSRSALLESLS LAAVYDPGEHISPPGASGASQEETYLQLGGPQGNQWGIWLTLRMRNYLQNKQLNLLYIPGTRDLQVQRLFSTRPQTSDLP GGLLDKLIALKPEQIPVGEELWLMDNSAAGAHLYIFTRLDERFAHSGWLGLEMDGKSVSAALSDQSAGDFMMFNSQGGLI FSSAPSARLSADVRHVQGGSFFGFLGGRWWPDHLVIRKQLGATDWQLVYSFDLQNLLKSLWPQLLAALLISLTGMALIGL LTHWVEVRLIAPALHRIQALVESEAFSRDVIQIAPVALCVLRRSDGRVVLENTLSQQWLGNGSERDQLCSGWIEQAFDPA RPNSSDYFETADGRHLYLSSAPTRYNGEDVLFCAFSDISARKQIEAALEEAKRLADTANEAKTLFLATMSHEIRTPLYGV LGTLELLSRTQLDNQQKDYLQAIEGSSGTLLQLICDVLDVSKIEAGQLALELSEFSSLDLVHEIIQGYAAAAQAKGLQFY ACVDPQLPEILLGDVTRIRQILSNLLNNAVKFTDTGRIVLRVRTESRDGERSNILWQVSDTGRGIAQDDQTLIFEPFYQT EGNTNVIAGTGLGLPICQRLTQLMNGNIRMVSELGLGSSFTLTLPLEASAVQGDTPLISPLLPEMVYVVSPVRELAESVA GWLRRWGARAQFSLPSPSDRARGNVLIELHPGSVEQRLEPDWQGPLVLASGDGHNEPRIDGGSWQINTNNLRAIHQAVSQ AQGVWVAQSEDHSDHRELKKLSLHVLVAEDNVINQLILKDQLEELGCSVELASNGEEALCIWKAGRFNVVLTDVNMPKLN GYELAQELRRQGCSIPIIGATANAMRGEEELCLAAGMNHCLVKPFALRALFNYLAPYERAPHEVL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| RL036 | AAP84163.1 | kinase sensor protein of two component regulatory system | Not tested | PAPI-1 | Protein | 1e-166 | 45 |
