Gene Information

Name : PFL_3183 (PFL_3183)
Accession : YP_260289.1
Strain : Pseudomonas protegens Pf-5
Genome accession: NC_004129
Putative virulence/resistance : Unknown
Product : NitT family nitrate/nitrite/cyanate ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1116
EC number : -
Position : 3664321 - 3665160 bp
Length : 840 bp
Strand : -
Note : identified by similarity to SP:P38045; match to protein family HMM PF00005

DNA sequence :
ATGAGCGGCCTGTTGAACGCACAGGCGATCAGCCTCGGCTACCCCGCGGCTCAAGGCTGGCACACGGTGCTGGAGGATTT
CGACCTGCACCTGCAGGCCGGCGAGGTGGTGTCCATTCTCGGCCCCAGCGGGGTCGGCAAATCCAGCCTGCTGCGGGTCC
TGGCCGGCCTGCAGAAGCCCCACGCCGGGCAGGTCAGCCTGTTGGGCGAGCCCCTCGACGGCCCTCATCCGCGGGTCGCG
GTGGCATTCCAGGACCCCAGCCTGCTGCCCTGGCTGAACCTGGAGCACAACGTCGCCTTCGGCCTGGATTTTGCCCGCCA
GCCGCACCTGAGCCCGCGCCAGCGCAAGGAACGCATCGACCAGGCGATTGCCGCAGTGGGCCTGGAACACGCCCGCCAGC
GCTATCCGGCCCAACTGTCCGGCGGCATGGCCCAGCGCACCGCACTGGCCCGCTGCCTGGCGCGCCAGCCCCAGGTGCTG
CTGCTGGATGAACCCTTCGGCGCGCTGGACGAGGTGACCCGCGCCGACATGCAGCAACTGCTGCTCAAGGTGATCGGCCA
GCACCGCACCGCGGCGCTGCTGATCACCCACGACATCGACGAAGCCCTGCTGCTGTCCGATCGGGTACTGCTACTGGGTA
ACAGCCCGGCGCGCACCCTCGGCCAGTGGCACATCGAGCTGCCGGCGCCGCGCGCCGAGCGGATCGAGGAACTGGGCGCG
CTGCGCATCGAGATTCTCAAGACCCTTCGGCGGGCGAGCCGCAACCCCCACACTTCCCCTTTGCCTGCACCGTCGGAGAT
TGACCATGTGCCTGGACGACTTCACTCATACCCGTCGTGA

Protein sequence :
MSGLLNAQAISLGYPAAQGWHTVLEDFDLHLQAGEVVSILGPSGVGKSSLLRVLAGLQKPHAGQVSLLGEPLDGPHPRVA
VAFQDPSLLPWLNLEHNVAFGLDFARQPHLSPRQRKERIDQAIAAVGLEHARQRYPAQLSGGMAQRTALARCLARQPQVL
LLDEPFGALDEVTRADMQQLLLKVIGQHRTAALLITHDIDEALLLSDRVLLLGNSPARTLGQWHIELPAPRAERIEELGA
LRIEILKTLRRASRNPHTSPLPAPSEIDHVPGRLHSYPS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 9e-38 45