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Name : paaL (PFL_3139) Accession : YP_260245.1 Strain : Pseudomonas protegens Pf-5 Genome accession: NC_004129 Putative virulence/resistance : Resistance Product : acetate permease Function : - COG functional category : R : General function prediction only COG ID : COG4147 EC number : - Position : 3609282 - 3610928 bp Length : 1647 bp Strand : + Note : identified by similarity to GB:ABF82245.1; match to protein family HMM PF00474; match to protein family HMM TIGR00813 DNA sequence : ATGAAGCGCCTGCTCACTCTATTCCTGCTGCCCTGCCTGCTGGCCACCGACCTGGCCCTGGCGGCCGACACGCCGGCGCG GCCATTGAACTGGAACGCCATCGGCATGTTCCTGGTGTTTGTCCTGATGACCCTCGGCATCACCCGCTGGGCCGCCCGGC GCACCCGCTCCGCCAGCGACTTCTATACCGCCGGTGGCGGCATGAGCGGCATGCAGAATGGCCTGGCGATCGCCGGCGAC ATGATTTCCGCGGCGTCCTTCCTCGGCATCTCGGCAATGATGTTCCTCAATGGCTACGACGGTCTGTTGTACGCACTGGG GGTGCTGGCCGGCTGGCCGATCATCCTGTTCCTGATCGCCGAACGCCTGCGCAACCTGGGCAAGTACACCTTCGCCGACG TGGTGTCCTATCGCCTGGCCCAGACGCCGGTGCGCCTGACCTCAGCCTTCGGCACCCTGAGCGTGGCGCTGATGTACCTG GTGGCGCAGATGGTCGGCGCCGGCAAGCTGATCGAGCTGCTGTTCGGCATCAGCTACCTCTATGCGGTGATGCTGGTGGG CCTGCTGATGGTCTGCTACGTGACCTTCGGCGGCATGCTGGCCACCACCTGGGTACAGATCATCAAGGCGCTGATGCTGC TCTCGGGCACCAGCTTCATGGCCTTCATGGTGCTCAAGCACTTCGGCTTCAGCAGCGAGGCGCTGTTCGCCCAGGCCAGC GCGGTGCACGCCAAGGGCAGCGCGATCATGGCCCCGGGTGGGTTGCTGTCGAACCCCATCGATGCCATTTCCCTGGGGCT GGGCATGATGTTCGGCACCGCCGGCCTGCCGCACATCCTCATGCGCTTCTTCACCGTCAGCGATGCCCGGGAAGCGCGCA AGAGCGTGTTCTACGCCACCGGTTTCATCGGCTACTTCTACCTGCTGCTGATCATTGTCGGCTTCGGCGCCATCGTCATG GTCGGTACCGAGCCCCAGTACCGCGATGCCGGCGGCGCGATCATCGGCGGCGCCAACATGGTTGCCGTGCACCTGGCCCA GGCGGTGGGCGGCAACCTGTTCCTGGGCTTCATCTCGGCCGTGGCCTTCGCCACCATCCTGGCGGTGGTGGCCGGGCTGG CGCTGTCCGGCGCCTCGGCGGTCTCCCACGACCTGTACGCCTGCGTGCTGCGCAAGGGCCAGGCCAGCACCCGGCAGGAA ATGCGCGTCTCGCGGATCGCCACCCTGTGCATCGGGGTGCTGGCGGTGCTGCTGGGGCTGTTGTTCGAATCGCAGAACAT TGCCTTTCTCTCGGGGCTGGTGCTGGCCATCGCCGCTTCGGTGAATTTCCCGGTGCTGTTTCTTTCCATGTTCTGGAAAG GCCTCACCACTCGCGGCGCGGTGGGCGGCAGCCTGGCTGGCCTGGTCTCGGCGATTGTGCTGCTGATGCTCAGCCCGGCG GTCTGGGTCAATGTGCTGCATCACCCCCAGGCGCTGTTTCCCTATGCCAACCCGGCGCTGTTTTCCATGAGCCTGGCGTT CTTCTGTGCCTGGGCCTTCTCCGTCAGCGACCGCTCGCCCCGGGCCGAACTGGAGCGCGGGCGCTACCTGGCGCAGTTCA TCCGTTCCATGACCGGCATTGGCGCATCCGACGCCACTCATCACTGA Protein sequence : MKRLLTLFLLPCLLATDLALAADTPARPLNWNAIGMFLVFVLMTLGITRWAARRTRSASDFYTAGGGMSGMQNGLAIAGD MISAASFLGISAMMFLNGYDGLLYALGVLAGWPIILFLIAERLRNLGKYTFADVVSYRLAQTPVRLTSAFGTLSVALMYL VAQMVGAGKLIELLFGISYLYAVMLVGLLMVCYVTFGGMLATTWVQIIKALMLLSGTSFMAFMVLKHFGFSSEALFAQAS AVHAKGSAIMAPGGLLSNPIDAISLGLGMMFGTAGLPHILMRFFTVSDAREARKSVFYATGFIGYFYLLLIIVGFGAIVM VGTEPQYRDAGGAIIGGANMVAVHLAQAVGGNLFLGFISAVAFATILAVVAGLALSGASAVSHDLYACVLRKGQASTRQE MRVSRIATLCIGVLAVLLGLLFESQNIAFLSGLVLAIAASVNFPVLFLSMFWKGLTTRGAVGGSLAGLVSAIVLLMLSPA VWVNVLHHPQALFPYANPALFSMSLAFFCAWAFSVSDRSPRAELERGRYLAQFIRSMTGIGASDATHH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAK01502.1 | putative amino acid transport protein | Not tested | PAGI-1 | Protein | 1e-126 | 60 |
| cur_1523 | YP_001800917.1 | transporter | Not tested | Not named | Protein | 7e-73 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| paaL | YP_260245.1 | acetate permease | BAC0564 | Protein | 3e-156 | 69 |
| paaL | YP_260245.1 | acetate permease | BAC0570 | Protein | 2e-144 | 65 |
