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Name : PFL_0275 (PFL_0275) Accession : YP_257421.2 Strain : Pseudomonas protegens Pf-5 Genome accession: NC_004129 Putative virulence/resistance : Unknown Product : S1 RNA binding domain-containing protein Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 320355 - 322679 bp Length : 2325 bp Strand : - Note : identified by match to protein family HMM PF00575; match to protein family HMM PF09371 DNA sequence : ATGGACAGCATCAACAGCCGCATTGCCGAGGAACTCGGCGTACGCCCACAACAGGTCGAAGCGGCCGTCGCTCTATTGGA TGAAGGCTCCACCGTGCCCTTCATCGCCCGCTACCGGAAAGAAGTCACCGGCAGCCTCGATGACACCCAGCTGCGTCATC TGGAAGAGCGCCTGCGCTACCTGCGAGAACTCGACGAACGGCGGATCAGCATCCTGGCCAGCATCGAAGAGCAAGGCAAG CTGACCCCGGAGCTGGCACGCGACATCAAGCTGGCCGACACCAAGACCCGCCTCGAAGACCTTTACCTGCCTTATAAGCA GAAGCGCCGCACCAAGGGCCAGATCGCCCTGGAAGCCGGCCTCGGCGAACTGGCCGACGGCCTGTTCAACGACCCGAACC TGGCTCCGGAAACCGAAGCCGCACGCTTCGTCGACGCCGAAAAAGGCGTGGCCGACGTGAAGGCCGCCCTGGAAGGCGCC AAGTACATCCTGATGGAGCGCTTCGCCGAAGACGCCAGCCTGCTGGAAAAGCTGCGCAATTTCCTCAAGCAGGAAGCGAC CATCAGCGCCCGCGTGATCGCCGGCAAGGAAGAGGAAGGCGCCAAGTTCCGCGACTACTTCGAACACGATGAACCACTCA AAAGCATGCCGTCGCACCGCGCCCTGGCAATTTTCCGTGGCCGCAACGAAGGCATTCTCAGCTCCGCGCTGAAAGTCGGT GACGAACTGCCGGGCACCATGCACCCGTGCGAAGGCATGATCGGCCAGCAATTCGGCATCCAGAACCAGAACCGCCCGGC CGACAAATGGCTCGGCGAAGTGGTGCGCTGGACCTGGAAGGTCAAGCTCTACACCCACCTGGAAACCGACCTGCTGGGCG AACTGCGCGATGGCGCGGAAACCGAGGCGATCAACGTCTTCGCCCACAACCTGCACGACCTGCTGCTGGCCGCTCCGGCC GGCCCGCGCGCCACCCTGGGCCTGGACCCGGGCCTGCGCACCGGCTGCAAGGTGGCGGTGGTGGATGCCACCGGCAAGCT GCTGGACCACGCCACCGTCTACCCCCATGTGCCGCATAACAAATGGGACCAGACTCTGGGCATTCTGGCTGCCCTGTGCG CCAAGCACTCGGTGGACCTGATCGCCATCGGCAACGGCACCGCCAGCCGGGAAACCGACAAGCTGGCGGCCGAGCTGATC AAGAAATACCCGGCCATGAAGATGACCAAGGTCATGGTCTCCGAAGCCGGTGCATCGGTGTACTCGGCCTCGGAGCTGGC GGCCAAGGAATTCCCGGACCTGGACGTATCGATCCGTGGCGCGGTGTCCATCGCCCGCCGCCTGCAGGATCCACTGGCCG AGCTGGTGAAGATCGACCCGAAATCCATCGGTGTCGGCCAGTACCAGCACGATGTCTCGCAACTGAAACTGGCCCGTGGC CTGGACGCGGTGGTGGAAGACTGCGTGAACGCCGTGGGCGTCGACGTCAACACCGCCTCCGTGGCCCTGCTGGCGCGGAT CTCCGGCCTCAACGCGACCCTGGCGCAGAACATCGTCAGCCACCGCGACGAACACGGTGCCTTCAAGACCCGCGCCGCGC TGAAAAAAGTCGCCCGCCTGGGTGAAAAGACCTTCGAACAGGCCGCCGGCTTCCTGCGTGTGATGAACGGCGACAACCCG CTGGACGCTTCCGCAGTGCACCCGGAAGCCTACCCGCTGGTACAACGCATCGCTGCCGACACCGGCCGCGACATCCGCTC GCTGATCGGCGACAGCGGCTTCCTCAAGCGCCTGGACCCGAAAAAGTTCACCGACGAAACCTTCGGCCTGCCCACCGTCA CCGACATCCTCCAGGAACTGGACAAGCCCGGCCGCGACCCGCGCCCCGAGTTCAAGACCGCCGAGTTCCAGGACGGTGTC GAAGACCTCAAGGACCTGCAACTGGGGATGATCCTCGAAGGCGTGGTGACCAACGTCACCAATTTCGGGGCCTTCGTCGA CATCGGCGTGCACCAGGACGGCCTGGTGCACATTTCGGCGCTGTCGGAGAAGTTCATCAAGGACCCACGCGAAGCGGTGA AGGCCGGTGACGTGGTGAAAGTGAAGGTCATGGAAGTCGATATCCCGCGCAAACGCGTCGGCCTGTCGATGCGCATGGGC GACACCCCGGGCGAGAAGATCGACGGTGCCCGTGGCTCCCGCCCCGGCTCGGCGCCACGCTCCTCCCAGGGCAATGCACC GCGCAAGGAGAGCGCCGCGCCCGCCCCGAGCAACAACGCCATGGCCTCGCTGTTCGCCAACGCCAAGCAGTTGAAGAAAC GCTGA Protein sequence : MDSINSRIAEELGVRPQQVEAAVALLDEGSTVPFIARYRKEVTGSLDDTQLRHLEERLRYLRELDERRISILASIEEQGK LTPELARDIKLADTKTRLEDLYLPYKQKRRTKGQIALEAGLGELADGLFNDPNLAPETEAARFVDAEKGVADVKAALEGA KYILMERFAEDASLLEKLRNFLKQEATISARVIAGKEEEGAKFRDYFEHDEPLKSMPSHRALAIFRGRNEGILSSALKVG DELPGTMHPCEGMIGQQFGIQNQNRPADKWLGEVVRWTWKVKLYTHLETDLLGELRDGAETEAINVFAHNLHDLLLAAPA GPRATLGLDPGLRTGCKVAVVDATGKLLDHATVYPHVPHNKWDQTLGILAALCAKHSVDLIAIGNGTASRETDKLAAELI KKYPAMKMTKVMVSEAGASVYSASELAAKEFPDLDVSIRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQLKLARG LDAVVEDCVNAVGVDVNTASVALLARISGLNATLAQNIVSHRDEHGAFKTRAALKKVARLGEKTFEQAAGFLRVMNGDNP LDASAVHPEAYPLVQRIAADTGRDIRSLIGDSGFLKRLDPKKFTDETFGLPTVTDILQELDKPGRDPRPEFKTAEFQDGV EDLKDLQLGMILEGVVTNVTNFGAFVDIGVHQDGLVHISALSEKFIKDPREAVKAGDVVKVKVMEVDIPRKRVGLSMRMG DTPGEKIDGARGSRPGSAPRSSQGNAPRKESAAPAPSNNAMASLFANAKQLKKR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 0.0 | 64 |
