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Name : bkdC (PFL_2531) Accession : YP_259638.1 Strain : Pseudomonas protegens Pf-5 Genome accession: NC_004129 Putative virulence/resistance : Unknown Product : dihydrolipoamide dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1249 EC number : 1.8.1.4 Position : 2799244 - 2800635 bp Length : 1392 bp Strand : - Note : identified by similarity to SP:P09063; match to protein family HMM PF00070; match to protein family HMM PF01134; match to protein family HMM PF02852; match to protein family HMM PF07992; match to protein family HMM TIGR01350 DNA sequence : ATGCAACAGACTCTCAATACCCAACTGTTGATCATCGGCGGCGGCCCTGGCGGTTATGTGGCGGCCATCCGCGCCGGTCA GCTGGGCATCTCCACCATTCTGGTGGAGGGCCAGTCCCTGGGCGGCACCTGCCTGAACATCGGTTGCATCCCGTCCAAGG CGCTGATCCATGTCGCCGAGCAGTTTCACCAGACCCGCCACCACAGCCAGGGCTCGGCCCTGGGCATCGAAGTGGCGGCG CCAACCCTGAACATCGGCAAGAGCGTGGAATGGAAGGACGGCATCGTCGACCGCCTGACCACCGGGGTCGCCGCGCTGCT GAAGAAAAACAAGGTCCAGGTGATCCAGGGCTGGGCCAGGGTCATCGACGGCAAGACCGTGGAAATCGAAGGCGCCGATA CCCGCATCCAGTGCGAGCACCTGCTGCTGGCCACCGGTTCGAAAAGCGTCAACCTGCCGATGCTGCCCATCGGCGGGCCG ATCATTTCCTCCACCGAGGCCCTGGCGCCCAAGACCCTGCCCAAGCGCCTGACCGTGGTCGGCGGCGGCTACATCGGCCT GGAACTGGGCATCGCCTACCGCAAGCTCGGGGTCGAGGTCAGCGTGGTGGAGGCCCAGGAACGCATCCTGCCCGCCTACG ACGGCGAACTGACCCAGCCGGTGCTGGACTCGGTGAAGCAGTTGGGGATCAAGCTCTACCTCAAGCACAGCGTGCTGGGC TTCGATGCCGCCAGCAGCAGCCTGCAGGTACGCGAGCCCAATGGCGACACCCTGAACCTGGCCACCGACCAGGTGCTGGT GGCGGTGGGCCGCAAGCCCAACACCCAGGGCTGGAACCTGGAAAGCCTGAACCTGGACATGAACGGCGCGGCCATCAAGA TCGACCACCGGTGCCAGACCAGCATGCGCAACGTCTGGGCCATCGGCGACCTGAGCGGTGAGCCGATGCTCGCGCACCGG GCCATGGCCCAGGGCGAGATGGTCGCCGAGCTGATCGCCGGCAAGCACCGGGAATTCAACCCGGCAGCGATCCCCGCGGT GTGCTTCACCGACCCGGAACTGGTGGTGGTGGGCAAGACCCCGGACGAGGCCCGCGCTGCCGGCCTGGATTGCATCGTCA GCAGCTTCCCGTTCGCGGCCAATGGCCGGGCCATGACCCTGGAATCGAAAAACGGTTTCGTGCGGGTGGTGGCCCGAAGT GACAATCACCTGATTGTCGGCTGGCAGGCAGTGGGAGTCGGAGTCTCCGAGTTGTCCACGGCGTTCGGCCAATCCCTGGA AATGGGCGCGCGCCTGGAAGACATCGGCGGCACCATCCACGCCCACCCGACCCTGGGTGAAGCGGTCCAGGAAGCGGCGC TGCGGGCACTGGGCCACGCCCTGCATCTGTAA Protein sequence : MQQTLNTQLLIIGGGPGGYVAAIRAGQLGISTILVEGQSLGGTCLNIGCIPSKALIHVAEQFHQTRHHSQGSALGIEVAA PTLNIGKSVEWKDGIVDRLTTGVAALLKKNKVQVIQGWARVIDGKTVEIEGADTRIQCEHLLLATGSKSVNLPMLPIGGP IISSTEALAPKTLPKRLTVVGGGYIGLELGIAYRKLGVEVSVVEAQERILPAYDGELTQPVLDSVKQLGIKLYLKHSVLG FDAASSSLQVREPNGDTLNLATDQVLVAVGRKPNTQGWNLESLNLDMNGAAIKIDHRCQTSMRNVWAIGDLSGEPMLAHR AMAQGEMVAELIAGKHREFNPAAIPAVCFTDPELVVVGKTPDEARAAGLDCIVSSFPFAANGRAMTLESKNGFVRVVARS DNHLIVGWQAVGVGVSELSTAFGQSLEMGARLEDIGGTIHAHPTLGEAVQEAALRALGHALHL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SE0077 | NP_763632.1 | dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3 | Not tested | SCCpbp4 | Protein | 1e-74 | 42 |
