|
Name : scoA (PFL_2323) Accession : YP_259430.1 Strain : Pseudomonas protegens Pf-5 Genome accession: NC_004129 Putative virulence/resistance : Unknown Product : succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A Function : - COG functional category : I : Lipid transport and metabolism COG ID : COG1788 EC number : 2.8.3.5 Position : 2588268 - 2588966 bp Length : 699 bp Strand : - Note : identified by similarity to SP:P56006; match to protein family HMM PF01144; match to protein family HMM TIGR02429 DNA sequence : ATGGCAGGTTTCGACAAGCGCGTGGCGTCCTACGAGGAAGCCCTGGAAGGTCTGCAAGACGGCATGACCGTGATCGCCGG CGGCTTCGGCCTGTGCGGTATCCCCGAAAACCTGATCGCCGAGATCAAGCGCCGCGGTACCCGCGACCTGACCGTGGTGT CCAACAACTGCGGGGTCGACGGTTTCGGCCTGGGCGTGCTCCTGGAAGACCGCCAGATCAGCAAGGTGATCGCCTCCTAC GTGGGTGAAAACGCCCTGTTCGAGAAGCAGTTGCTCAGCGGCGAGATCGAAGTGGTACTGACCCCCCAGGGCACCCTGGC GGAAAAAATGCGCGCCGGCGGCGCCGGGATCCCGGCCTTCTTCACCGCCACCGGCGTCGGCACCCCGGTGGCCGACGGCA AGGAAACCCGCGAATTCAAGGGCCGCACCTACCTGATGGAAGAGTCCATCACCGGTGACTTCGCCATCGTCAAGGGCTGG AAGGCCGACCACTTCGGCAACGTGGTCTACCGCCACACCGCGCAGAACTTCAACCCCCTGGCGGCCACCGCCGGCAAGAT CACCGTGGTCGAAGTGGAAGAAATCGTCGAACCGGGCGAGCTGGACCCGACGCAGATCCACACCCCCGGCATCTACGTCG ACCGGGTCATCTGCGGCACCTTCGAGAAGCGCATCGAACAGCGCACCGTGCGCAAGTGA Protein sequence : MAGFDKRVASYEEALEGLQDGMTVIAGGFGLCGIPENLIAEIKRRGTRDLTVVSNNCGVDGFGLGVLLEDRQISKVIASY VGENALFEKQLLSGEIEVVLTPQGTLAEKMRAGGAGIPAFFTATGVGTPVADGKETREFKGRTYLMEESITGDFAIVKGW KADHFGNVVYRHTAQNFNPLAATAGKITVVEVEEIVEPGELDPTQIHTPGIYVDRVICGTFEKRIEQRTVRK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAO18070.1 | unknown | Not tested | TTSS locus | Protein | 3e-31 | 41 |
