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Name : PFL_0229 (PFL_0229) Accession : YP_257375.1 Strain : Pseudomonas protegens Pf-5 Genome accession: NC_004129 Putative virulence/resistance : Virulence Product : sigma-54-binding protein Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG2204 EC number : - Position : 265520 - 266452 bp Length : 933 bp Strand : + Note : identified by similarity to SP:P17899; match to protein family HMM PF00158 DNA sequence : ATGAGTGCCCATACCCCATTCGGTCAGCCGTTGCTGACCTTTCCCGATGCCGAGAAAAGCCCCCTGAGCATCCGCGCCAA GGCGCTGGTGTTCGTCGACCCGCGCTCGCGGCAGTTGCGCGAAGAGCTGGAGCAACTGGCGCCGCGTTCGGTTTCGGTAC TGATCCGTGGCGAAACCGGCACCGGCAAGGAGCTGCTGGCCCGGCACATCCACCGTGCCAGCGATCGCAGTGGCCTGTTC GTCTCGGTGAACTGCGGCGCCATCAGCCCGACCTACGCCGACGCCGAACTGTTCGGTTATGCCGCCGGCAGTTTCAGCGG TTCGGCCAGCAGCCGCGCCGGCTGGTTCGGCTCGGCCAACGGCGGGACCCTGTACCTGGATGAAATCGGCGACCTGCCGC TGCCGATCCAGACCAAGCTGCTGGCCGCCCTGGAGAACCACGAAGTGACCCGGGTCGGCGCCCAGCAACCGAGCCCGGTG GACGTGCGCCTGGTGGCGGCCACCAGCATCGACCTGGCCCAGGCGGTGGCGGCGGGCAAGTTTCACGAGCGCCTGTATCG CTACCTCAGCGAAGGCCAGCTGGAACTGCCGGCGCTGCGGGAACGGGTGGGAGACATCGAGTCCCTGGCCGAATACTTCC TCGGCATCTACAGCCAGCGCCTGGACCTGCCGGTGCCGCTGATCAGCGAAGCCGCGCAGCAGGCCCTGAATCGCCACAGC TGGCCGGGCAACACCCGGGAGCTGGAGAACGTCATCCACTTTGCGCTGCTGGTCAGCAGCGGCGAGGAGATACTGCCCGA GCACCTCAACCTGCCGCCGACGCCCTCGCCGCTGGAGCAGATCCAGCAGTTGTTGCAGCAGATCGCCGAGATCGGATCCG CTGTCGAGCGCCAGGCGCTGCACCAGTTGCTGCAACGCACCGCCCTGACCTGA Protein sequence : MSAHTPFGQPLLTFPDAEKSPLSIRAKALVFVDPRSRQLREELEQLAPRSVSVLIRGETGTGKELLARHIHRASDRSGLF VSVNCGAISPTYADAELFGYAAGSFSGSASSRAGWFGSANGGTLYLDEIGDLPLPIQTKLLAALENHEVTRVGAQQPSPV DVRLVAATSIDLAQAVAAGKFHERLYRYLSEGQLELPALRERVGDIESLAEYFLGIYSQRLDLPVPLISEAAQQALNRHS WPGNTRELENVIHFALLVSSGEEILPEHLNLPPTPSPLEQIQQLLQQIAEIGSAVERQALHQLLQRTALT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrpR | NP_791206.1 | type III transcriptional regulator HrpR | Virulence | Hrp PAI | Protein | 3e-27 | 41 |
| hrpR | AAC34752.1 | HrpR | Virulence | Hrp PAI | Protein | 3e-27 | 41 |
