Gene Information

Name : arsR (PFL_2186)
Accession : YP_259293.1
Strain : Pseudomonas protegens Pf-5
Genome accession: NC_004129
Putative virulence/resistance : Resistance
Product : arsenic resistance transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0640
EC number : -
Position : 2442048 - 2442395 bp
Length : 348 bp
Strand : -
Note : identified by similarity to GB:AAC69642.1; match to protein family HMM PF01022

DNA sequence :
ATGATCACGCCTCCCGAAGTCTTCAAAAGCCTGGCCGACGAAACCCGTGTGCGCGCCACTCTGCTGATCGCCGATCAGGG
TGAGCTGTGTGTCTGCGAGCTGATGTGTGCACTCGACGACAGCCAGCCAAAAATCAGCCGCCACCTGGCGCAACTGCGCA
GCAGTGGCTTGCTGCTCGATCGCCGCCAGGGCCAATGGGTGTATTACCGCCTCAACCCCGAGTTGCCGGGCTGGGTCCGG
GAGATTCTGCATGTGACGGCCAAGGCCAACGCCGCTTGGCTCAAGGACAACGCCGCGCGCCTGCAGAACATGGATGGCCG
CCCCGTTCGCGAAGCCGCTTGCTGCTGA

Protein sequence :
MITPPEVFKSLADETRVRATLLIADQGELCVCELMCALDDSQPKISRHLAQLRSSGLLLDRRQGQWVYYRLNPELPGWVR
EILHVTAKANAAWLKDNAARLQNMDGRPVREAACC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsR AFC76435.1 ArsR Not tested AbaR5 Protein 3e-20 59
arsR CAJ77018.1 arsenite inducible repressor Not tested AbaR1 Protein 2e-20 59
arsR2 YP_001007630.1 DNA-binding transcriptional repressor ArsR Not tested YAPI Protein 2e-21 54

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
arsR YP_259293.1 arsenic resistance transcriptional regulator BAC0594 Protein 2e-21 61
arsR YP_259293.1 arsenic resistance transcriptional regulator BAC0591 Protein 7e-21 52
arsR YP_259293.1 arsenic resistance transcriptional regulator BAC0588 Protein 6e-20 50
arsR YP_259293.1 arsenic resistance transcriptional regulator BAC0589 Protein 5e-22 49