|
Name : arsB (PFL_2185) Accession : YP_259292.1 Strain : Pseudomonas protegens Pf-5 Genome accession: NC_004129 Putative virulence/resistance : Resistance Product : arsenical pump membrane protein Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1055 EC number : - Position : 2440744 - 2442027 bp Length : 1284 bp Strand : - Note : identified by similarity to GB:AAC69643.1; match to protein family HMM PF02040; match to protein family HMM PF03600; match to protein family HMM TIGR00935 DNA sequence : ATGTTTGTCGCTGTGGCTGTTTTTCTCTTCACCCTGATTCTCGTCATCTGGCAGCCCAAGGGCCTCGGCGTCGGTTGGAG CGCCACGCTCGGCGCAATCATCGCGCTGGCGGTGAGCGCGGTATCGCTGCAGGACATTCCCACGGTGTGGGCCATTGTCT GGAACGCCACCGCGACTTTCATCGCGGTGATCATCATCAGTCTGCTTCTGGACGAGGCCGGGTTCTTCGAATGGGCCGCC CTGCATGTGGCGCGCTGGGCCAGGGGCAGCGGCCATCGGCTGTTCGCCTTCTGCGTGCTGCTGGGGGCGGCGGTGTCGGC GCTGTTTGCCAATGACGGTGCAGCGCTGATCCTCACGCCCATCGTCATGTCGATGCTGCTGGCGCTGCGTTTCAGCCCCG GAGCGACCCTGGCCTTCGTCATGGCCGCGGGCTTCATTGCCGACACCGCGAGCCTGCCGCTGGTGGTGTCCAACCTGGTG AATATCGTGTCCGCCGACTACTTCCGGCTGGGGTTCGCCGAGTACGCGGCGGTGATGCTGCCGGTGAGCCTGGCCAGTGT CGCAATGACCTTGCTGGTGCTGTTCCTCTATTTCCGCAAGGACCTGCCGCACCGCTACGCCCTGGATGCGCTGCCGCAAC CTTGCACGGCGATCCGTGACCGGGCCACCTTCAGGGTCGGGGGCTGGACCCTGCTGATGCTGCTGGTCGGGCTGTTCGCC CTGGAGCCCCTGGGTATTCCCATCAGCGCCGTGGCGGCGGCCTGTGCCGCGCTGCTGTTTGCCGTCGCCGCCAAGGGCCA CCGGATCTCCACGCGCCGGGTGCTGCGCGAGGCGCCGTGGCAGATCGTGGTGTTCTCGCTGGGCATGTACCTGGTGGTGT ACGGCCTGAAGAATGCCGGCCTGACGGACCTGCTGGCCCAGGTGCTGAACCGCCTGGCCGAACAGGGGCTGTGGAGCGCC ACCCTGGGCACGGGCCTGTTGTCGGCGCTGCTGTCCTCGGTGATGAACAACATGCCCAGCGTGCTGATCGGCGCGCTGTC GATACAGGCCAGCGAGGCACAGGGGCTGGTGCGCGAGGCGATGATCTACGCCAACGTCATCGGCTGCGACCTGGGCCCGA AAATCACCCCCATCGGCAGCCTCGCCACGTTGCTCTGGCTGCACGTGCTGGAGCGCAAGGGCCTGCGCATCACCTGGGGG TATTACTTCAAGGTCGGCGTGCTGCTGACCCTCCCGGTTCTGCTGGTCACCCTTTCGGCCCTGGCCCTGCGCCTGAGCCT CTGA Protein sequence : MFVAVAVFLFTLILVIWQPKGLGVGWSATLGAIIALAVSAVSLQDIPTVWAIVWNATATFIAVIIISLLLDEAGFFEWAA LHVARWARGSGHRLFAFCVLLGAAVSALFANDGAALILTPIVMSMLLALRFSPGATLAFVMAAGFIADTASLPLVVSNLV NIVSADYFRLGFAEYAAVMLPVSLASVAMTLLVLFLYFRKDLPHRYALDALPQPCTAIRDRATFRVGGWTLLMLLVGLFA LEPLGIPISAVAAACAALLFAVAAKGHRISTRRVLREAPWQIVVFSLGMYLVVYGLKNAGLTDLLAQVLNRLAEQGLWSA TLGTGLLSALLSSVMNNMPSVLIGALSIQASEAQGLVREAMIYANVIGCDLGPKITPIGSLATLLWLHVLERKGLRITWG YYFKVGVLLTLPVLLVTLSALALRLSL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| arsB2 | YP_001007633.1 | arsenical pump membrane protein | Not tested | YAPI | Protein | 3e-129 | 72 |
| arsB | YP_005754065.1 | arsenical pump membrane protein | Not tested | Type-XI SCCmec | Protein | 4e-95 | 55 |
| arsB | YP_252017.1 | arsenical pump membrane protein | Not tested | SCCmec | Protein | 3e-98 | 55 |
| SH0109 | YP_252024.1 | arsenical pump membrane protein | Not tested | SCCmec | Protein | 4e-98 | 54 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| arsB | YP_259292.1 | arsenical pump membrane protein | BAC0031 | Protein | 3e-125 | 73 |
| arsB | YP_259292.1 | arsenical pump membrane protein | BAC0578 | Protein | 8e-127 | 72 |
| arsB | YP_259292.1 | arsenical pump membrane protein | BAC0576 | Protein | 2e-127 | 72 |
| arsB | YP_259292.1 | arsenical pump membrane protein | BAC0577 | Protein | 9e-123 | 70 |
| arsB | YP_259292.1 | arsenical pump membrane protein | BAC0574 | Protein | 1e-97 | 55 |
| arsB | YP_259292.1 | arsenical pump membrane protein | BAC0575 | Protein | 1e-97 | 54 |
