|
Name : PFL_2162 (PFL_2162) Accession : YP_259269.2 Strain : Pseudomonas protegens Pf-5 Genome accession: NC_004129 Putative virulence/resistance : Unknown Product : acyl-CoA synthetase Function : - COG functional category : I : Lipid transport and metabolism COG ID : COG0318 EC number : - Position : 2415779 - 2417401 bp Length : 1623 bp Strand : - Note : identified by match to protein family HMM PF00501 DNA sequence : ATGTCCATCTACGAGCAAGGCCTGGCGCCGACTGCCGTCAACCATATCGCCCTCTCCCCCTTGAGCTTCATCGAGCGTAC CGCTGCGGTTTACCCCGATTACCCGGCGGTGATCCACGGTTCGATCCGTCGCACCTGGGCCCAGACCTACAGCCGCTGCC GGCGCCTGGCCTCGGCCCTGGCCGGGCGCGGCATCGGCAAGAACGACACGGTGGCGGTGATGCTGCCCAACATCCCGGCA ATGCTCGAAGCACACTTCGGCGTGCCGATGATCGGCGCCGTGCTCAATGCCCTCAATGTGCGCCTGGACGCCGAGGCCAT CGCCTTCATGCTGGCCCACGGCGAAGCCAAGGTGCTGATCGCCGACCGCGAGTTCCATGAGGTGATCCACGCCGCCGTGG CCATGCTCGATCACCCGCCCCTGGTGATCGACCTCGACGACCCGGAATACGGCGAAGGCCAGCCGGTCAGCGATCTGGAT TACGAGGCCTTTCTCGCCGAGGGCGATCCCGAGTTTGCCTGGCAGTGGCCGGATGACGAGTGGCAGGCCATCGCCCTGAA CTACACCTCGGGCACCACCGGCAACCCCAAGGGCGTGGTCTATCACCACCGCGGCGCCTACCTCAATGCCCTGGGCAACC AGATGACCTGGGCCATGGGCAACCACCCGGTGTACCTGTGGACCCTGCCAATGTTCCACTGCAACGGCTGGTGCTACCCC TGGACCGTCACCGCCCTGGCCGGAGTGCATGTGTTTTTGCGCCGGGTCGACCCGCAGAAGATCCTCGACCTGATCCGCGA GCATCAGGTCACGCACCTGTGCGGCGCGCCCATCGTGCTCAATGCCCTGGTGAACATGCCCGACACCGCCAAGGCGGCCA TCGACCACCCGGTCAACGCCATGGTGGCCGGGGCCGCGCCGCCGGCCAAGGTGATCGGCGCAGTGGAGGAAATGGGCATC AAGGTGACCCACGTCTACGGCCTGACCGAGGTCTATGGCCCGGTGACCCTGTGCGCCTGGCACGCCGCCTGGGATGAACT GCCCCTGGAACAGCGGGCGCAGATCAAGTCGCGCCAGGGCGTGCGCTACCCGACCCTGGAAGGGGTGATGGTGGCCGACC CGAAAACCCTCGAACCCACGCCCCGGGACGGCCAGACCATCGGCGAGATCTTCATGCGCGGCAACACCGTGATGAAGGGC TACCTGAAGAACCCCACGGCCACCGCCGAAGCCTTCGAGGGCGGCTGGTTCCACACCGGCGACCTGGGGGTAACCCACCC GGACGGCTACGTGGAGATCCGCGACCGGCTCAAGGACATCATCATTTCCGGCGGCGAGAACATTTCCACCATCGAACTGG AAGGCGTGCTCTATCGCCACCCGGCGGTGCTGGAAGCGGCGGTGGTGGCCCGGCCCGATGAAAAATGGGGTGAGACGCCC TGTGCCTTCATCACCCTCAAGGCCGATCATCAGGACGTGCGCGAAGCCGAGATCATCGCCTTCTGTCGCGAACACCTGGC AGGCTTCAAGGTGCCGCGTACCGTGGTCTTCAGCCCGTTGCCCAAGACCTCCACCGGCAAGATCCAGAAGTTCGTCCTGC GCGACATGGCGAAAAACCTCTAG Protein sequence : MSIYEQGLAPTAVNHIALSPLSFIERTAAVYPDYPAVIHGSIRRTWAQTYSRCRRLASALAGRGIGKNDTVAVMLPNIPA MLEAHFGVPMIGAVLNALNVRLDAEAIAFMLAHGEAKVLIADREFHEVIHAAVAMLDHPPLVIDLDDPEYGEGQPVSDLD YEAFLAEGDPEFAWQWPDDEWQAIALNYTSGTTGNPKGVVYHHRGAYLNALGNQMTWAMGNHPVYLWTLPMFHCNGWCYP WTVTALAGVHVFLRRVDPQKILDLIREHQVTHLCGAPIVLNALVNMPDTAKAAIDHPVNAMVAGAAPPAKVIGAVEEMGI KVTHVYGLTEVYGPVTLCAWHAAWDELPLEQRAQIKSRQGVRYPTLEGVMVADPKTLEPTPRDGQTIGEIFMRGNTVMKG YLKNPTATAEAFEGGWFHTGDLGVTHPDGYVEIRDRLKDIIISGGENISTIELEGVLYRHPAVLEAAVVARPDEKWGETP CAFITLKADHQDVREAEIIAFCREHLAGFKVPRTVVFSPLPKTSTGKIQKFVLRDMAKNL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAK01500.1 | AMP-binding protein domain | Not tested | PAGI-1 | Protein | 7e-141 | 57 |
