Gene Information

Name : cat (PFL_2085)
Accession : YP_259193.1
Strain : Pseudomonas protegens Pf-5
Genome accession: NC_004129
Putative virulence/resistance : Resistance
Product : chloramphenicol O-acetyltransferase
Function : -
COG functional category : R : General function prediction only
COG ID : COG0110
EC number : 2.3.1.28
Position : 2309884 - 2310519 bp
Length : 636 bp
Strand : -
Note : identified by similarity to SP:P23364

DNA sequence : 
ATGAACAACTACTTCGATAGCCCCTTCAAGGGCATCACGCTTGATCGGCAAGTCACCCACCCGAATATTCGAGTAGGTCG
TTTCAGCTACTACTCAGGCTACTACCACGGCCATAGTTTCGATGAGTGCGCGCGCTACCTGCCCCACGAGGAAGGTGCGG
ACAAGCTGATAATCGGCTCTTTCTGCTCAATCGGCTCGGGAGCCGCATTCATCATGGCCGGCAACCAGGGGCATAGAAGC
GAGTGGATCAGCACCTTTCCGCTCTACTGGATGCCCGAGGAACCGGCCTTCGCGGGCGCGCAGAATGGATATCAAGCCGC
AGGCGACACGGTGATAGGCAATGACGTCTGGATCGGTTCCGAAGCCATTGTCATGCCGGGCATCAGGATCGGCGATGGCG
CCGTGATAGGCACTCGAGCCCTGGTGACACGGGACGTGGAACCCTACGCAATCATCGGCGGTAACCCCGCCAAGACGATT
CGCAAGCGCTTCGATGATCGGCGTATCGAGATGCTTGTGGAAATGCAGTGGTGGAACTGGAGCAGCGAGCAGTTGAAAGC
AGTGATGCCACTGATGACCAGTGCCAATGTCGAGGCGCTGTTTGAACATTGGCAGGAGCACATCCGCCCCGACTGA

Protein sequence : 
MNNYFDSPFKGITLDRQVTHPNIRVGRFSYYSGYYHGHSFDECARYLPHEEGADKLIIGSFCSIGSGAAFIMAGNQGHRS
EWISTFPLYWMPEEPAFAGAQNGYQAAGDTVIGNDVWIGSEAIVMPGIRIGDGAVIGTRALVTRDVEPYAIIGGNPAKTI
RKRFDDRRIEMLVEMQWWNWSSEQLKAVMPLMTSANVEALFEHWQEHIRPD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
catB8 YP_005797132.1 chloramphenicol acetyltransferase Not tested AbaR4e Protein 2e-62 70
catB3 AET25385.1 chloramphenicol acetyltransferase Not tested PAGI-2(C) Protein 1e-62 70
catB3 AFG30108.1 chloramphenicol acetyltransferase Not tested PAGI-2 Protein 1e-62 70

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cat YP_259193.1 chloramphenicol O-acetyltransferase AY123251.gene2.p01 Protein 6e-63 70
cat YP_259193.1 chloramphenicol O-acetyltransferase AY740681.1.gene5.p01 Protein 6e-63 70
cat YP_259193.1 chloramphenicol O-acetyltransferase AF322577.2.gene4.p01 Protein 6e-63 70
cat YP_259193.1 chloramphenicol O-acetyltransferase NC_002516.2.878374.p Protein 3e-63 68
cat YP_259193.1 chloramphenicol O-acetyltransferase JF268688.1.gene6.p01 Protein 2e-56 63
cat YP_259193.1 chloramphenicol O-acetyltransferase CP001581.1.gene990.p Protein 6e-38 41