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Name : PFL_2022 (PFL_2022) Accession : YP_259141.1 Strain : Pseudomonas protegens Pf-5 Genome accession: NC_004129 Putative virulence/resistance : Unknown Product : ImpB/MucB/SamB family protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0389 EC number : - Position : 2244215 - 2245495 bp Length : 1281 bp Strand : + Note : identified by match to protein family HMM PF00817 DNA sequence : ATGTCTAAACACAATGAGCCGGTGTTTGCCCTGATCGACTGCAATAGCTTCTATGCCAGTTGCGAGCGAGTGTTTCGCCC TGATCTGGCAAAGGTGCCGATTGTTGTGCTGAGCAATAACGACGGTTGTGTCATTGCGCGCAGCTATGACGCAAAGTCCT TCGTCAAAATGGGAGAGCCGTATTTTCAGATCAAGCACAAGCTGAGGCAGCACGGCATTGTGGCGTTCTCTTCGAACTAT GCCCTCTACGGCGACATGAGCGAGCGGGTGATATCGCTGATCGAATCGATGGTACCGGCAGTCGAGGTGTACAGCATCGA TGAAGCCTTCGCAGATCTCACGGGAATCAATAGCCTTGAGCAGTTCGGCCGCCAGATCCGGGCCCAGGTGCTGCGCTGTA CAGGCATTCCGGTTGGTGTAGGGATCGCACCTACAAAGACGCTCGCCAAGTTGGCCAACCACACTGCCAAGCGTCTACAA GCGCACACTGGGGGCGTTGTAGATATTACCGATCAGGTGAAGCGAGATTGGGTGTTGCGAAACACTGATGTCGCCGAGGT GTGGGGTATCGGCCGGCGGATGAAGGCGCATCTGGACGGGATGGGAATCAAGTCTGCTATGGACCTGGCCAAGGCTGATC CGTGGACGTTGCGCAAAAATTTCAGTGTCGTGATCGAGAAGACGGCCCGGGAGTTGGCGGGCACGCCGTGCCTGGAACTG GACGAGCCAGATCCGCCGAAACAGGAGATCTGCTGTAGTCGGATGTTTGGGAAGCGACTAACCGAGTTGGCCCCTATCAA GGAGGCGGTTGCTACTTACATGATGAGAGCCTCGGAAAAACTACGGGCTCAGAACTCATTGTGTAAGAAAATCCGCGTCA GCATTCGCACGGGCATGTTTAACCCCGAGGAAGCCAAGTATGCAAACGGTGTCCTGGTAGAACTGCCGTATCCAACCAAT GACGTCAGACTAATGACGAAAATGGCTGTGGAAGCGCTGGACCGCGTTTTCAGGCCGGGTTTCAAATACAGTAAGGCCGA GGTCCTGTTGTTGAATCTGTGCCAACCAAGCGAGTACACCGGCGATCTCTTCGCCTTAGCGCAACCATCTGAAACCGACA AGGTGATGAAGGTTCTGGACCAGATCAACAGTCGCTGGGGGAGGGGCACACTCCGTGCTGCCAGCGTCCCTACCAATCCC GATTGGGGTATGCGGCGGGAGATGATGAGCCAGAGTTACACGACGAAGCTTGATCAGCTTTGGAAGGTGTCCTGCAACTG A Protein sequence : MSKHNEPVFALIDCNSFYASCERVFRPDLAKVPIVVLSNNDGCVIARSYDAKSFVKMGEPYFQIKHKLRQHGIVAFSSNY ALYGDMSERVISLIESMVPAVEVYSIDEAFADLTGINSLEQFGRQIRAQVLRCTGIPVGVGIAPTKTLAKLANHTAKRLQ AHTGGVVDITDQVKRDWVLRNTDVAEVWGIGRRMKAHLDGMGIKSAMDLAKADPWTLRKNFSVVIEKTARELAGTPCLEL DEPDPPKQEICCSRMFGKRLTELAPIKEAVATYMMRASEKLRAQNSLCKKIRVSIRTGMFNPEEAKYANGVLVELPYPTN DVRLMTKMAVEALDRVFRPGFKYSKAEVLLLNLCQPSEYTGDLFALAQPSETDKVMKVLDQINSRWGRGTLRAASVPTNP DWGMRREMMSQSYTTKLDQLWKVSCN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rulB | CAI36137.1 | nucleotidyltransferase/DNA polymerase | Not tested | PPHGI-1 | Protein | 8e-167 | 79 |
| unnamed | ABR13403.1 | DNA-directed DNA polymerase | Not tested | PAGI-5 | Protein | 3e-123 | 68 |
| samB | NP_458681.1 | UV protection protein | Not tested | SPI-7 | Protein | 2e-84 | 47 |
| umuC | NP_807889.1 | DNA polymerase V subunit UmuC | Not tested | SPI-7 | Protein | 2e-84 | 47 |
