Gene Information

Name : PFL_2021 (PFL_2021)
Accession : YP_259140.1
Strain : Pseudomonas protegens Pf-5
Genome accession: NC_004129
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG2135
EC number : -
Position : 2243016 - 2243699 bp
Length : 684 bp
Strand : -
Note : identified by match to protein family HMM PF02586

DNA sequence :
ATGTGCGGACGACTTTCACAATACAGCGGCATTCACGACTTTGTTGCAGCCCTGAGCATGCCCGGGGCACTGATAAATAA
CGTCGGTGACCAGCCGCTGAGACGGTACAACGCAGCGCCGACGATGCAGCTCGCCCTCTTCCATGTTGCCGGAGGCACCT
TGCAGGCAGACCCAGTTCGGTGGGGATGGCGACCACACTGGGCAACGGACCGGGCCGCACCGATCAATGCCCGCATCGAG
AAAGTGGCCCATGGCCCGTACTTTCGACAGATCTGGCCGCATCGGGCTATCTGCCCCATCGATAGTTGGTTCGAATGGAT
CGATGAAGGTGGCCCTAAAAAGCAGCCCTACCTCATCCGGCACCGCGACGGCTCCCCTGTCCTCTGCGCCTCAATTGGAC
AACTACCGGTCCCGGACTTGGGCGAGCACGACGGCTTTGTGATAATCACCGCCGACGCCCAAGGTGGCATGGTCGACATT
CACGACCGCCGGCCGATAGCCCTGGCCCCGGATCTGGCCCAGGAATGGCTTGATCCTGCAACGCCCAAGGAACGCGCCGA
GCAGATGGCCCGCCACCAGAGCGAGCCCGCCAAAACCTTCGAGTGGTTCAGGATCAGCACTGCAGTGGGTAACGTCCGGA
ATCAAGGGGCTGAGCTAATACAGCCTTTGGCGTCACCTTCATAG

Protein sequence :
MCGRLSQYSGIHDFVAALSMPGALINNVGDQPLRRYNAAPTMQLALFHVAGGTLQADPVRWGWRPHWATDRAAPINARIE
KVAHGPYFRQIWPHRAICPIDSWFEWIDEGGPKKQPYLIRHRDGSPVLCASIGQLPVPDLGEHDGFVIITADAQGGMVDI
HDRRPIALAPDLAQEWLDPATPKERAEQMARHQSEPAKTFEWFRISTAVGNVRNQGAELIQPLASPS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13389.1 hypothetical protein Not tested PAGI-5 Protein 2e-63 58
pph98 CAI36139.1 hypothetical protein Not tested PPHGI-1 Protein 2e-43 44