Gene Information

Name : PFL_2005 (PFL_2005)
Accession : YP_259124.1
Strain : Pseudomonas protegens Pf-5
Genome accession: NC_004129
Putative virulence/resistance : Unknown
Product : baseplate J-like protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG3948
EC number : -
Position : 2229065 - 2229946 bp
Length : 882 bp
Strand : +
Note : identified by match to protein family HMM PF04865

DNA sequence :
ATGAGCATGCTGGACTTGTCGGTACTGCCGGCGCCGCAGGTGCTGGAAGCCCTGGACTTTGAAGCGTTGTATCAGGGCAA
GCTGGCGGCCTTTCGCCGGCACATGGGCGAGAACTGGACCGCCGACCTGGAGAGCGACCCGGTCACCAAGCAGCTGGAGC
TGTCGGCCTACGGCGATATGCAGCTGCGGGCGCGGGTCAATGATGCGGCCAAGGCGCTGCTGCTGGCCCATGCCAAAGGC
ACGGACTTGGATCATCTGGCGGCCAACGTGAACTTGCAGCGCCTGGTGATTCAGGCCGGTGACCCGCAGGCGGTGCCGCC
GGTGGAGGAGGTCAAGGAGGCCGACGACGCTCTGCGCGAGCGTGTCCAGTTGGCCTATGAGGGCCTGACCACGGCTGGCC
CGCGTAACAGCTACATCCTGCATGCGCGCAATGCCTCGGCCCTGGTGGCGGATGCCGAGGCCGAAAGCCCGTCGCCGGCC
TGTGTGACGGTCACGGTGCTGAGCCTGGAAGGCGACGGCGCGGCCGCTCCCGAGCTGCTGGCGACTGTCGCGGCAGCCCT
CAATGATGAGGATGTGAGGCCACTGGGAGATCGGGTCACAGTCCAGAGTGCCCAGGTGCTGCCGTATCGCATTGACGCGG
TGCTGCACATGAAGGGGCCAGGGCCGGAGAGTGATGCCGCGCTGGCAGAGGCAGAGCGCAAGCTGGCCGCCTGGGTCAAC
CCGCGCCGGCGCCTGGGTATTGAGGTGGCGCGTTCAGCCATTGATGCGCAGTTGCATGTGGCCGGTGTGGCCCGGGTCGA
GTTGACGGGGTGGCAGGACATTGCCCCAACCAGGGCTCAAGCGGCGTATTGCACCGGCTACAGCGTCACCCTGGGAGGCT
GA

Protein sequence :
MSMLDLSVLPAPQVLEALDFEALYQGKLAAFRRHMGENWTADLESDPVTKQLELSAYGDMQLRARVNDAAKALLLAHAKG
TDLDHLAANVNLQRLVIQAGDPQAVPPVEEVKEADDALRERVQLAYEGLTTAGPRNSYILHARNASALVADAEAESPSPA
CVTVTVLSLEGDGAAAPELLATVAAALNDEDVRPLGDRVTVQSAQVLPYRIDAVLHMKGPGPESDAALAEAERKLAAWVN
PRRRLGIEVARSAIDAQLHVAGVARVELTGWQDIAPTRAQAAYCTGYSVTLGG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13480.1 predicted baseplate or tail fiber base Not tested PAGI-6 Protein 7e-49 55
STY4613 NP_458695.1 probable phage baseplate assembly protein Not tested SPI-7 Protein 2e-48 48
t4307 NP_807903.1 phage baseplate assembly protein Not tested SPI-7 Protein 2e-48 48