|
Name : PFL_1906 (PFL_1906) Accession : YP_259025.1 Strain : Pseudomonas protegens Pf-5 Genome accession: NC_004129 Putative virulence/resistance : Unknown Product : zinc-binding dehydrogenase family oxidoreductase Function : - COG functional category : R : General function prediction only COG ID : COG2130 EC number : - Position : 2127298 - 2128341 bp Length : 1044 bp Strand : + Note : identified by similarity to SP:P76113; match to protein family HMM PF00107 DNA sequence : ATGCCGCAAACATTGACCCTCAATCAGCGCGTGGTACTGGTCTCTCGGCCCGAAGGCGCGCCGGTCCCGGAGAATTTCCG CCTGGAGCGGGTGGCCTTGCCGGAACTGGCTGATGGCCAGGTGCTGTTGAAGACCCTCTACCTGTCCCTGGACCCCTACA TGCGCGGGCGCATGAGTGATGCCCCGTCCTATGCGGCGCCGGTGGAAATAGACGAGGTCATGACCGGCGGTGCAGTGAGC CGGGTCGAGCGTTCGCTCAACCCCAAGTTCCAGGAGGGCGACCTGGTGGTGGGCGCCACTGGTTGGCAGAGCCACTGCAT TTGCGATGGCCGCAATCTGATCCCGGTGCCCTCTGGCCTGCCCAGCCCTTCCATGGCCCTGGGTGTGCTCGGCATGCCCG GAATGACCGCCTACATGGGGCTGATGGACATCGGCCAGCCCAAGGCCGGGGAAACCCTGGTGGTGGGTGCTGCCTCCGGC GCCGTGGGGTCGGTGGTGGGGCAGGTGGCGAAGCTCAAGGGGCTGCGGGTGGTGGGCGTGGCCGGTGGCGCCGACAAATG CCGCTATGTGGTCGAGGAGCTGGGTTTTGATGCCTGCATCGATCACAAGAGCCCCGACTTTGCCGACGAACTGGCCCAGG CCTGCTTCAAGGGCGTGGACATCTATTTTGAGAACGTCGGTGGCAAGGTCTTCGACGGGGTACTGCCCCTGCTCAACCCC AGGGCGCGTATTCCCCTGTGCGGGCTGATCGCCCAGTACAACGCCCAGGCGCTGCCGCCGGGGCCGGATCGCCTGCCACT GCTGCAGCGCACCTTGCTCACCAAGCGGGTACGCATCCAGGGCTTTATTGTCTTCGACGACTATGGCGACCGCCATCCGG AGTTCATCAAGGCCATGGCGCCCTGGGTGCGCGAAGGCAAGGTCAAGTTCAAGGAGGACGTGGTCGAGGGACTGGAGCAG GCACCAGAAGCCTTCATTGGCCTGCTGGAGGGGCGCAACTTCGGCAAGCTGGTGGTCAAGGTCGCCCCGGACGCGAGCAT TTGA Protein sequence : MPQTLTLNQRVVLVSRPEGAPVPENFRLERVALPELADGQVLLKTLYLSLDPYMRGRMSDAPSYAAPVEIDEVMTGGAVS RVERSLNPKFQEGDLVVGATGWQSHCICDGRNLIPVPSGLPSPSMALGVLGMPGMTAYMGLMDIGQPKAGETLVVGAASG AVGSVVGQVAKLKGLRVVGVAGGADKCRYVVEELGFDACIDHKSPDFADELAQACFKGVDIYFENVGGKVFDGVLPLLNP RARIPLCGLIAQYNAQALPPGPDRLPLLQRTLLTKRVRIQGFIVFDDYGDRHPEFIKAMAPWVREGKVKFKEDVVEGLEQ APEAFIGLLEGRNFGKLVVKVAPDASI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SH0097 | YP_252012.1 | hypothetical protein | Not tested | SCCmec | Protein | 2e-64 | 48 |
