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Name : actP (PFL_1712) Accession : YP_258838.1 Strain : Pseudomonas protegens Pf-5 Genome accession: NC_004129 Putative virulence/resistance : Resistance Product : acetate permease Function : - COG functional category : R : General function prediction only COG ID : COG4147 EC number : - Position : 1914764 - 1916422 bp Length : 1659 bp Strand : + Note : identified by similarity to SP:P32705; match to protein family HMM PF00474; match to protein family HMM TIGR00813 DNA sequence : ATGATCCGACGTCTATTCGCAGCACTCGGTCTTGCCGCCTTCGCTCCCGCCCTCTGGGCTGCAGACGCCTTGACGGGCGA AGTCCACAAGCAACCACTCAACGTATCGGCGATCGTGATGTTCGTGGTCTTCGTCGGTGCCACCCTGTGCATCACCTACT GGGCCTCCAAGCGCAACAAGTCGGCTGCCGACTATTACGCGGCGGGCGGCAAGATCACCGGCTTCCAGAACGGCCTGGCG ATCGCTGGCGACTACATGTCCGCGGCGTCCTTCCTGGGGATTTCCGCCCTGGTGTTCACTTCTGGCTATGACGGCCTGAT CTACTCCATCGGCTTCCTGGTGGGCTGGCCGATCATTCTGTTCCTGATCGCCGAGCGCCTGCGCAACCTGGGCAAGTACA CCTTTGCCGACGTGGCGTCCTACCGCCTCGGACAGACCCAGATCCGCACCCTGTCGGCCTGTGGCTCGCTGGTGGTGGTG GCGTTCTACCTGATCGCGCAGATGGTGGGTGCCGGCAAGCTGATCCAACTGCTGTTCGGCCTCGACTACCATGTGGCGGT GATCCTGGTGGGCATCCTGATGTGCCTGTACGTGCTGTTCGGCGGCATGCTGGCCACGACCTGGGTGCAGATCATCAAGG CGGTGCTGTTGCTCTCCGGCGCGTCCTTCATGGCACTGATGGTGATGAAGCACGTCAACTTCGACTTCAACACCCTGTTC TCCGAAGCGATCAAGGTTCACCCCAAGGGTGAAGCGATCATGAGCCCCGGCGGCCTGGTGAAAGATCCGATCTCGGCGTT CTCCTTAGGCCTCGCGCTGATGTTCGGTACCGCTGGCCTGCCCCACATCCTGATGCGCTTCTTCACCGTCAGCGATGCCA AGGAAGCTCGCAAGAGCGTGCTCTATGCCACTGGCTTCATCGGCTACTTCTACATCCTGACCTTCATCATCGGCTTCGGC GCGATCCTGCTGGTAAGCACCAACCCGGACTTCAAGGATGCCGCAGGCGCCTTGCTGGGCGGCAACAACATGGCGGCGGT GCACCTGGCCAACGCAGTGGGCGGCAGCGTGTTCCTCGGCTTCATTTCGGCCGTGGCCTTCGCCACCATCCTGGCGGTCG TTGCAGGCCTGACCCTGGCTGGCGCCTCGGCGGTGTCCCATGACCTGTATGCCAGCGTGATCAAGAAGGGCAAGGCCAAC GAGAAGGACGAGATCCGCGTTTCCAAGATCACCACCGTGGCATTGGGCGTACTGGCCATCGGCCTGGGCATTCTCTTTGA AAGCCAGAACATCGCGTTCATGGTCGGCCTGGCGTTCTCCATTGCCGCCAGCTGCAACTTCCCGGTACTGCTGCTTTCCA TGTACTGGAAGAAGCTCACCACCCGTGGCGCCATGATTGGCGGCTGGATGGGCCTGGTGAGTGCCGTGGCGCTGATGATC CTCGGCCCGACCATCTGGGTGCAGATCCTGCATCACGAGAAGGCGATCTTCCCGTACGAGTACCCGGCGCTGTTCTCGAT GATCATCGCCTTCATCGGTATCTGGTTCTTCTCCATCACCGACAAGTCGACCGCGGCGGTCAACGAGCGGGCGCTGTTCT TCCCGCAGTTCGTGCGTTCGCAGACCGGCCTGGGTGCCAGTGGGGCGGTGTCGCACTAA Protein sequence : MIRRLFAALGLAAFAPALWAADALTGEVHKQPLNVSAIVMFVVFVGATLCITYWASKRNKSAADYYAAGGKITGFQNGLA IAGDYMSAASFLGISALVFTSGYDGLIYSIGFLVGWPIILFLIAERLRNLGKYTFADVASYRLGQTQIRTLSACGSLVVV AFYLIAQMVGAGKLIQLLFGLDYHVAVILVGILMCLYVLFGGMLATTWVQIIKAVLLLSGASFMALMVMKHVNFDFNTLF SEAIKVHPKGEAIMSPGGLVKDPISAFSLGLALMFGTAGLPHILMRFFTVSDAKEARKSVLYATGFIGYFYILTFIIGFG AILLVSTNPDFKDAAGALLGGNNMAAVHLANAVGGSVFLGFISAVAFATILAVVAGLTLAGASAVSHDLYASVIKKGKAN EKDEIRVSKITTVALGVLAIGLGILFESQNIAFMVGLAFSIAASCNFPVLLLSMYWKKLTTRGAMIGGWMGLVSAVALMI LGPTIWVQILHHEKAIFPYEYPALFSMIIAFIGIWFFSITDKSTAAVNERALFFPQFVRSQTGLGASGAVSH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAK01502.1 | putative amino acid transport protein | Not tested | PAGI-1 | Protein | 2e-133 | 61 |
| cur_1523 | YP_001800917.1 | transporter | Not tested | Not named | Protein | 6e-75 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| actP | YP_258838.1 | acetate permease | BAC0564 | Protein | 0.0 | 81 |
| actP | YP_258838.1 | acetate permease | BAC0570 | Protein | 3e-144 | 67 |
