Gene Information

Name : PFL_1658 (PFL_1658)
Accession : YP_258784.1
Strain : Pseudomonas protegens Pf-5
Genome accession: NC_004129
Putative virulence/resistance : Unknown
Product : short chain dehydrogenase/reductase family oxidoreductase
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 1858330 - 1859151 bp
Length : 822 bp
Strand : +
Note : identified by match to protein family HMM PF00106; match to protein family HMM PF01370; match to protein family HMM PF08659

DNA sequence :
ATGAGGCTGGGAGGTGTTCCTCCCAATGGCCGCACATATTCTTCGGAGGGCAGCACAGTGAATGCTGACAACAGTTTTAA
TCCATTCAGCCTCAAGGGTAAGCGAGTCTTGGTTACCGGTGCCAGCTCGGGGCTGGGGCAGGCTATAGCGCTGAGTTTCG
CGCGCATGGGGGCCGAGGTCATTGCAACGGCACGTGATCGTGAGCGTCTGACCAAGACTTTTGAAGAGTTGCAGAGCATT
TCGGATCTGCCTCATCAGATGATCTTGGCTGACCTGACGATTGCAGAGGAGCGCAACGCTGTTGTTGCAGCCCTTGGTTC
GGAAATTCATGGGTTGGTGCACAGTGCCGGCATTTCTCGCCTGTGTCCGACGCGCATGATGACTGACACTCATCTTCAGG
AAGTGCACGCCATTAACTTTGAAGCTCCTATGCTACTTACCCAAGGGGTTTTGAAGCGCAATCTTGTAGCAGATGATGGG
TCCATTCTATTTCTTTCATCTATCGCTGCCCATATCGGTGTTGCAGGTGTGGGGGCTTATTCCGCGAGCAAGGCTGCTTT
GATTGCTGCGTCGCGTTGTCTTGCTATGGAGTTAGTCAAGCGTCGGATTCGAGTTAATTGCCTTTCTCCTTCACTGGTGG
AAACACCGATCTTGGCGGAAACCGCCAAGGTGACCTCTCTTGATCAACTGCTTGAAGATTATCCTCTAGGGTTTGGTCGG
CCAGATGATATTGCTAATGCGGCGATTTTCATGATTTCCGGTGCTAGCCGTTGGATAACAGGAACAACACTGGTCATGGA
TGGTGGTTTGACCATCAGTTAA

Protein sequence :
MRLGGVPPNGRTYSSEGSTVNADNSFNPFSLKGKRVLVTGASSGLGQAIALSFARMGAEVIATARDRERLTKTFEELQSI
SDLPHQMILADLTIAEERNAVVAALGSEIHGLVHSAGISRLCPTRMMTDTHLQEVHAINFEAPMLLTQGVLKRNLVADDG
SILFLSSIAAHIGVAGVGAYSASKAALIAASRCLAMELVKRRIRVNCLSPSLVETPILAETAKVTSLDQLLEDYPLGFGR
PDDIANAAIFMISGASRWITGTTLVMDGGLTIS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK15329.1 unknown Not tested Not named Protein 7e-65 72