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Name : PFL_1483 (PFL_1483) Accession : YP_258610.2 Strain : Pseudomonas protegens Pf-5 Genome accession: NC_004129 Putative virulence/resistance : Unknown Product : major facilitator family transporter Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2271 EC number : - Position : 1669928 - 1671262 bp Length : 1335 bp Strand : + Note : identified by match to protein family HMM PF07690 DNA sequence : ATGCCCATGAACACTGCAACCGCCGCGCCGCCCCGGGACCCGCAACAACTGACCCGGCTGATGTTCCTCAAGCTGATGCC GCTGCTGATCGCGGCCTATGTCCTGAGTTTTCTCGACCGCACCAATATCGCCCTGGCCAAGCATCAGCTGGATGTGGACC TGGGGATTTCCGCCGCGGCCTACGGGCTGGGGGCCGGACTGTTCTTCCTCACCTATGCGCTGTCCGAAGTGCCGAGCAAC CTGATCATGCACAAGGTCGGCGCGCGCTTCTGGATCGCCCGGATCATGGTGACCTGGGGGCTGATCTCCGCCGCCATGGC TTTCGTCCAGGGCGAGACCTCCTTCTATGTGCTGCGCCTGCTGCTGGGGATCGCCGAGGCCGGGCTGTTTCCCGGGGTCA TGCTGTACCTGACCTACTGGTTCGACCGCCAGCAGCGGGCCCGGGCCACCGGCTATTTCCTGCTGGGGGTGTGCCTGGCC AATATCATTGGCGGCCCGCTGGGCGCGGCGCTGATGAAGATGGACGGCCTTTTGGGCTGGCACGGCTGGCAGTGGATGTT CCTGCTCGAAGGCCTGCCGGCGGTGTTCTTCGCCTGGGTGGTATGGCGGCGCCTGCCGGACCGCCCGAGCCGTGCTCCCT GGCTGAGCGCCGAGGAAGCGGCGGCCATCGAACAGCGCCTGGCCCGGGAAGCCGACGAGGGCGCGGGGCAGGGCGGGCAC TCGTTCCGGCAATGCTTCACGCCACAGATCCTGCTGGCGATCTTTGTCTACTTCTGCCATCAGATCACCATCTACACCGT GATCTTTTTCCTCCCCAGCATCATCGGCAAGTACGGCAACCTGAGCATCATGAGCGTTGGCCTTTTGACCTCGCTGCCCT GGATCGCCGCAGCCGTCGGGGCTATCGCCTTGCCCCGGCTGGCCAACAGCCCGCAACGCTCGCGGCGCCTGCTGGTCTGT GGCTTGCTGGTGATGGCGGCGGGGCTGTCGATCGCGGCGTTTTCCGGGCCGGTGTTCAGCCTGCTGGGGTTCTGCGTGGC GGCGCTGATGTTCTTCGTGGTGCAGTCGATCATCTTCCTGTACCCGGCTTCACGGCTCAAAGGCGCGGCGTTGGCGGGTG GCCTGGGCTTCGTCAATTCCTGCGGGCTGCTGGGCGGTTTTGTCGGCCCTTCGGTGATGGGCGCGATCGAGATGAGCACC GGCAATGCCATGAATGGCCTCAAGGTGATTGCCCTGGTGCTGCTGGTGGCGGCATTGGCGGCCCTGCGTTTGCGCCAGGG CCAGGAGGACCGCAGTGAGCAGAGGACGAGTGGGCTGGCGAGAAACTCCGCCTGA Protein sequence : MPMNTATAAPPRDPQQLTRLMFLKLMPLLIAAYVLSFLDRTNIALAKHQLDVDLGISAAAYGLGAGLFFLTYALSEVPSN LIMHKVGARFWIARIMVTWGLISAAMAFVQGETSFYVLRLLLGIAEAGLFPGVMLYLTYWFDRQQRARATGYFLLGVCLA NIIGGPLGAALMKMDGLLGWHGWQWMFLLEGLPAVFFAWVVWRRLPDRPSRAPWLSAEEAAAIEQRLAREADEGAGQGGH SFRQCFTPQILLAIFVYFCHQITIYTVIFFLPSIIGKYGNLSIMSVGLLTSLPWIAAAVGAIALPRLANSPQRSRRLLVC GLLVMAAGLSIAAFSGPVFSLLGFCVAALMFFVVQSIIFLYPASRLKGAALAGGLGFVNSCGLLGGFVGPSVMGAIEMST GNAMNGLKVIALVLLVAALAALRLRQGQEDRSEQRTSGLARNSA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAT96176.1 | major facilitator family transporter | Not tested | T-PAI | Protein | 5e-46 | 42 |
| unnamed | AAT96099.1 | major facilitator family transporter | Not tested | T-PAI | Protein | 6e-46 | 41 |
| unnamed | AAT96228.1 | major facilitator family transporter | Not tested | T-PAI | Protein | 6e-46 | 41 |
| unnamed | AAT96055.1 | major facilitator family transporter | Not tested | T-PAI | Protein | 6e-46 | 41 |
