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Name : cupB2 (PFL_1463) Accession : YP_258590.1 Strain : Pseudomonas protegens Pf-5 Genome accession: NC_004129 Putative virulence/resistance : Unknown Product : pilus assembly chaperone CupB2 Function : - COG functional category : N : Cell motility COG ID : COG3121 EC number : - Position : 1641329 - 1642072 bp Length : 744 bp Strand : + Note : identified by similarity to GB:AAG07472.1; match to protein family HMM PF00345; match to protein family HMM PF02753 DNA sequence : ATGACGCCGACTGCGCGTTTTGTTCATTCTCTCGTTATCGGTGTCATGTTCCTGGGGATACTGTCGGGGGTCGCGCATGC CGGGATAGTACTGGAAGGTACGCGCCTGGTTTATCCAGCAGAGGCTCGTGAAGTTACATTGAAGTTGAGTAACACCGGCT CTGTGGCCTTGTTGGCGCAAAGTTGGATCGACGAAGGCGATGCCAACAAGTCTCCTGAGGAAATCAAGGTTCCCTTTCTT CTGGCCCCAGCAGTCAGCCGGGTGGAAGCGGGAGGCTCGGCAATATTGCGTGTGTCTTATTCAAAAGAACCCTTGGCAAA AGATCGCGAATCGTTGTTCTGGCTGAATGTACTGGAAACGCCACCACGGCGAAAACAGGACGAGAACGTGTTGCAGTTTG CATTCAGGACTCGGATCAAGATTTTCTTCCGCCCTGACAACTTGATTGGCAATGCGGGCATGGCTGGCGAAAAGCTCAAG TGGGAATTAAGTCGAGCAGGCGCTTCGCAAGTTCCGGTTATCAAAGTGTTTAACCCAACACCTTATTACGTGTCCTTCGG ACGCATGGAAGTTGCTGTGTCAGGCCGTCGAATCGATTTGAAGCCAGGCATGGTCGCACCCTTCGGATATGAGTCTTTCC CCTGGCCAGCGAGCGCTCCGTCACAGCCGACCAAGGCATCAATCGAATATGAGGTGATCGATGATTTCGGCGGCCGAGGC CTGCTGAAAAAGTCGCTTCTTTGA Protein sequence : MTPTARFVHSLVIGVMFLGILSGVAHAGIVLEGTRLVYPAEAREVTLKLSNTGSVALLAQSWIDEGDANKSPEEIKVPFL LAPAVSRVEAGGSAILRVSYSKEPLAKDRESLFWLNVLETPPRRKQDENVLQFAFRTRIKIFFRPDNLIGNAGMAGEKLK WELSRAGASQVPVIKVFNPTPYYVSFGRMEVAVSGRRIDLKPGMVAPFGYESFPWPASAPSQPTKASIEYEVIDDFGGRG LLKKSLL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ecpD1 | AAO49832.1 | pilin chaperone ecpD1 | Not tested | SPI-3 | Protein | 1e-41 | 42 |
