|
Name : PFL_1362 (PFL_1362) Accession : YP_258491.1 Strain : Pseudomonas protegens Pf-5 Genome accession: NC_004129 Putative virulence/resistance : Unknown Product : polysaccharide deacetylase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0726 EC number : - Position : 1540359 - 1541240 bp Length : 882 bp Strand : + Note : identified by match to protein family HMM PF01522 DNA sequence : ATGGCTAAAGAAATTCTCTGTGCATTTGGTGTCGATGTGGACGCGGTGGCCGGCTGGCTCGGTTCCTACGGCGGCGAGGA CTCGCCGGACGACATCTCCCGCGGCCTGTTCGCCGGCGAGGTCGGTGCGCCGCGCCTGCTCAAGCTGTTCGAGCGTTATG GCCTGCGCACCACCTGGTTCATTCCCGGCCACTCCATGGAGACCTTTCCCGAGCAGATGAAGGCGGTTGCCGAGGCCGGC CACGAGATCGGCGTGCACGGCTACAGCCACGAAAACCCCATCGCCATGACCCCGGAACAGGAAGAGATCGTCCTCGACAA ATCCATCGAGCTGATCACCCGGGTCACCGGCAAGCGCCCCACCGGCTACGTTGCGCCCTGGTGGGAATTCAGCAAGGTGA CCAATGAGCTGCTGCTGAAAAAGGGCATCAAGTACGACCACAGCCTGATGCACAACGACTTCCATCCCTACTACGTGCGG GTCGGCGACAGCTGGACCAAGATCGACTACAGCCAGCACCCCGACACCTGGATGAAACCTTTGGTGCGGGGCCAGGAAAC CGACCTGGTGGAGATCCCGGCCAACTGGTACCTGGACGACCTGCCGCCGATGATGTTCATCAAGAAGGCGCCCAACAGCC ACGGTTTCGTCAACCCGCGGCACCTGGAGGAAATGTGGCGCGACCAGTTCGACTGGGTCTACCGCGAGCATGAGCACGCG GTGTTCACCATGACCATCCACCCCGACGTCTCCGGCCGCCCGCAAGTGCTGTTGATGCTCGAACGCCTGATCGAACACAT CCAGAGCCATGCCGGCGTGCGCTTCGTCACCTTCGACGAGATCGCCGACGACTTTATCCGCCGCCACCCGCGCAACCGCT GA Protein sequence : MAKEILCAFGVDVDAVAGWLGSYGGEDSPDDISRGLFAGEVGAPRLLKLFERYGLRTTWFIPGHSMETFPEQMKAVAEAG HEIGVHGYSHENPIAMTPEQEEIVLDKSIELITRVTGKRPTGYVAPWWEFSKVTNELLLKKGIKYDHSLMHNDFHPYYVR VGDSWTKIDYSQHPDTWMKPLVRGQETDLVEIPANWYLDDLPPMMFIKKAPNSHGFVNPRHLEEMWRDQFDWVYREHEHA VFTMTIHPDVSGRPQVLLMLERLIEHIQSHAGVRFVTFDEIADDFIRRHPRNR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAB46604.1 | hypothetical protein | Not tested | HPI | Protein | 2e-124 | 86 |
