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Name : mutS (PFL_1209) Accession : YP_258340.1 Strain : Pseudomonas protegens Pf-5 Genome accession: NC_004129 Putative virulence/resistance : Virulence Product : DNA mismatch repair protein MutS Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0249 EC number : - Position : 1383370 - 1385949 bp Length : 2580 bp Strand : - Note : identified by match to protein family HMM PF00488; match to protein family HMM PF01624; match to protein family HMM PF05188; match to protein family HMM PF05190; match to protein family HMM PF05192; match to protein family HMM TIGR01070 DNA sequence : ATGAGTAAAAATACCTCCGATCTGTCCTCCCACACGCCGATGATGCAGCAGTACTGGCGCCTCAAGAACCAGCACCCTGA TCAGTTGATGTTCTACCGCATGGGCGACTTCTACGAGATCTTCTATGAAGACGCGAAGAAGGCCGCCAAGCTGCTGGACA TTACCCTGACGGCGCGCGGGCAGTCGGCCGGCCAGGCGATTCCCATGTGCGGTATTCCTTACCACGCCGCCGAGGGCTAC CTGGCCAAGCTGGTAAAGCTCGGCGAGTCGGTGGTGATCTGCGAACAGGTGGGGGACCCGGCGACCAGCAAGGGCCCGGT GGAACGCCAGGTGGTGCGTATCATCACGCCAGGCACCGTGAGTGACGAGGCTCTGCTGGATGAGCGCCGCGACAACCTGA TCGCCGCCGTGCTGGGCGACGAGCGTCTGTTCGGCCTGGCGGTGCTGGACATCACCAGCGGCAACTTCAGCGTCCTGGAA ATCAAGGGCTGGGAGAATTTGCTGGCCGAGTTGGAACGCATCAACCCAGTGGAGCTGCTGATCCCCGATGACTGGCCACA AGGCTTGCCGGCAGAAAAACGCCGCGGTGTGCGACGCCGTGCCCCCTGGGATTTCGAGCGGGACTCGGCGCACAAGAGCC TCTGCCAGCAGTTCTCTACCCAGGACCTCAAGGGCTTTGGCTGCGAAACCCTGACCCTGGCCATCGGCGCCGCCGGTTGC CTGCTCAGCTATGCCAAGGAAACCCAGCGTACCGCCCTGCCCCACCTGCGCAGCCTGCGTCATGAGCGCCTGGATGACAC CGTGGTGCTGGACGGTGCCAGCCGTCGCAACCTGGAACTGGACACCAACCTGGCGGGCGGGCGCGACAACACCCTGCAAT CGGTGGTCGATCGCTGCCAGACCGCCATGGGCAGCCGTTTGCTGACCCGCTGGCTGAACCGCCCGCTGCGCGACCTCAAG GTCCTGGAAGCGCGCCAATCCTCTATTACTTGCCTGCTGGACGGCTACCGTTTCGAACGGTTGCAACCGCAGTTGAAGGA AATCGGCGATATCGAGCGGATTCTGGCGAGGATCGGCCTGCGCAATGCCCGTCCGCGGGACTTGGCCCGTCTACGTGATG CTCTGGCTGCACTGCCGGAGCTGCAAGAAGCCATGACCGAACTGGAGGCCACTCACCTCAATCAGCTGGCCGCCACCACC AGCACCTACCCGGAACTGGCCGCTCTGCTGGCCAAGGCCATCATCGACAATCCGCCGGCGGTGATCCGTGACGGCGGTGT ACTCAAGACCGGCTACGACGCCGAGCTCGACGAGCTGCAGTCGCTGAGCGAGAACGCCGGACAGTTCCTGATTGACCTGG AAGCCCGCGAGAAAGCCCGTACCGGCCTGGCCAACCTCAAGGTCGGCTACAACCGTATCCATGGCTATTTCATCGAGCTG CCAAGCAAGCAAGCCGAACAGGCCCCGGCGGACTACATTCGCCGCCAGACATTGAAAGGCGCCGAGCGCTTCATCACTCC GGAACTCAAGGAGTTCGAAGACAAGGCGCTATCGGCCAAGAGCCGTGCCCTGGCCCGGGAGAAGATGCTCTACGACGCGC TGCTGGAAACCCTGATCAGCCATTTGCCGCCGTTGCAGGATACCGCTGGTGCCCTGGCTGAACTGGACGTGTTGAGCAAC CTGGCCGAGCGCGCCTTGAACCTGGACCTCAACTGCCCACGTTTTGTCAGCGAACCTTGCATGCGCATCACCCAGGGTCG TCACCCGGTGGTGGAGCAAGTGTTGACCACGCCGTTCGTGGCCAACGACCTGAGCCTGGACGACAACACGCGGATGCTGG TGATCACCGGTCCGAACATGGGCGGTAAATCCACCTATATGCGCCAGACGGCCCTGATCGTGCTGCTGGCCCATATCGGC AGCTTCGTCCCGGCGGCGAGCTGCGAGCTGTCCCTGGTGGACCGGATCTTCACCCGTATCGGCTCCAGCGACGACCTGGC CGGCGGCCGTTCGACCTTCATGGTGGAAATGAGCGAAACCGCGAACATCCTGCACAACGCAACGGAACGCAGCCTGGTGC TGATGGACGAAGTGGGACGCGGTACCAGCACCTTTGACGGACTTTCCCTGGCCTGGGCTGCGGCAGAACGTCTCGCCCAC CTGCGCGCCTATACCCTGTTCGCCACCCACTATTTCGAACTGACGGTACTGCCGGAAAGCGAGCCGCTGGTGGCCAACGT GCACCTCAATGCCACCGAGCACAATGAGCGCATTGTGTTCCTGCACCATGTCCTTCCAGGCCCAGCCAGCCAGAGCTATG GGCTGGCGGTAGCCCAGCTGGCCGGGGTTCCCAGCGCAGTCATCACCCGCGCCCGGGAGCACTTGAGCCGCCTGGAAACC ACCAGCTTGCCCCATGAAGTGGCGCCTCAAGCGCCGGGCAAACCCTCGGTTCCGCAACAAAGCGACATGTTCGCCAGCCT GCCGCACCCGGTGCTCGACGACCTGGCCAAGCTGGATCTGGATGACATGACGCCACGCCGAGCGCTGGAAATGCTCTATA CATTGAAGACACGCATCTAA Protein sequence : MSKNTSDLSSHTPMMQQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQAIPMCGIPYHAAEGY LAKLVKLGESVVICEQVGDPATSKGPVERQVVRIITPGTVSDEALLDERRDNLIAAVLGDERLFGLAVLDITSGNFSVLE IKGWENLLAELERINPVELLIPDDWPQGLPAEKRRGVRRRAPWDFERDSAHKSLCQQFSTQDLKGFGCETLTLAIGAAGC LLSYAKETQRTALPHLRSLRHERLDDTVVLDGASRRNLELDTNLAGGRDNTLQSVVDRCQTAMGSRLLTRWLNRPLRDLK VLEARQSSITCLLDGYRFERLQPQLKEIGDIERILARIGLRNARPRDLARLRDALAALPELQEAMTELEATHLNQLAATT STYPELAALLAKAIIDNPPAVIRDGGVLKTGYDAELDELQSLSENAGQFLIDLEAREKARTGLANLKVGYNRIHGYFIEL PSKQAEQAPADYIRRQTLKGAERFITPELKEFEDKALSAKSRALAREKMLYDALLETLISHLPPLQDTAGALAELDVLSN LAERALNLDLNCPRFVSEPCMRITQGRHPVVEQVLTTPFVANDLSLDDNTRMLVITGPNMGGKSTYMRQTALIVLLAHIG SFVPAASCELSLVDRIFTRIGSSDDLAGGRSTFMVEMSETANILHNATERSLVLMDEVGRGTSTFDGLSLAWAAAERLAH LRAYTLFATHYFELTVLPESEPLVANVHLNATEHNERIVFLHHVLPGPASQSYGLAVAQLAGVPSAVITRAREHLSRLET TSLPHEVAPQAPGKPSVPQQSDMFASLPHPVLDDLAKLDLDDMTPRRALEMLYTLKTRI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| mutS | AAA80578.1 | DNA mismatch repair protein | Virulence | SPI-1 | Protein | 0.0 | 56 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| mutS | YP_258340.1 | DNA mismatch repair protein MutS | VFG0562 | Protein | 0.0 | 59 |
