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Name : hom (PFL_1103) Accession : YP_258234.1 Strain : Pseudomonas protegens Pf-5 Genome accession: NC_004129 Putative virulence/resistance : Unknown Product : homoserine dehydrogenase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0460 EC number : 1.1.1.3 Position : 1258575 - 1259879 bp Length : 1305 bp Strand : + Note : identified by similarity to SP:P29365; match to protein family HMM PF00742; match to protein family HMM PF01842; match to protein family HMM PF03447 DNA sequence : GTGAATCCGGTCAAAGTAGGCATCTGTGGGCTGGGTACTGTCGGTGGCGGTACCCTAAACGTACTTCAGCGCAACGCCGA GGAGATTGCCCGCCGTGCCGGGCGTGGAATCGAAGTAGCGCAGATTGCTACCCGTACGCCAAAGCCGCAGTTCCAAACGA CCGGTATTGCGATTACCAACGATGTCTTCGCCGTGGCCACCAACCCTGAAATCGATATCGTCATCGAGCTGGTGGGCGGC TACACCGTGGCCCGTGACCTGGTGCTCAAGGCCATCGAGAACGGCAAGCACGTGGTCACCGCGAACAAGGCGCTGATCGC CGTGCACGGCAACGAAATCTTCGCCAAGGCCCAGGAGAAGGGCGTGATCGTCGCTTTCGAAGCCGCCGTTGCCGGTGGCA TCCCGGTGATCAAGGCGATCCGCGAAGGCCTCTCGGCCAACCGTATCAACTGGCTGGCGGGGATCATCAACGGCACCGGT AACTTCATCCTCTCGGAAATGCGCGAGAAGGGCCGCACCTTTGAAGACGTGCTGGCCGAAGCCCAGGCCCTGGGCTACGC CGAAGCCGACCCGACCTTCGACGTCGAAGGCATCGATGCCGCGCACAAGCTGACCATCCTGGCCTCCATCGCCTTTGGTA TCCCGCTGCAGTTCGACAAGGCCTACACCGAAGGCATCACCAAGCTCACCACCGCCGACGTGAACTACGCCGAGGCCCTG GGCTACCGCATCAAGCACCTGGGTGTGGCGCGCCGCACCGAGGCCGGTATCGAGCTGCGGGTGCACCCGACCCTGATTCC GGCCGATCGCCTGATCGCCAACGTCAACGGTGTGATGAACGCGGTCATGGTCAATGGCGATGCTGCCGGTTCGACCCTGT TCTACGGCGCCGGCGCGGGCATGGAGCCGACCGCTTCCTCGGTGGTGGCCGACCTGGTGGACGTGGTTCGCGCCATGACC AGTGACCCGGAAAACCGCGTGCCGCACCTGGCGTTCCAGCCTGACTCGCTATCGGATCATCCGATCCTGCCGATCGAGTC CTGCGAGAGCGCCTACTACCTGCGCATCCAGGCCAAGGATCACCCGGGCGTACTGGCCCAGGTGGCGAGCATCCTCTCGG AGCGCGGCATCAACATCGAATCGATCATGCAGAAGGAAGTGGAAGAGCAGGACGGCCTGGTGCCGATGATCCTGCTGACC CACCGTGTTCTGGAGCAGCACATCAACGATGCGATCACCGCCCTGGAGGCCCTGCAGGGCGTCGTTGGCCCGGTGGTGCG TATCCGCGTCGAACATTTGAATTAA Protein sequence : MNPVKVGICGLGTVGGGTLNVLQRNAEEIARRAGRGIEVAQIATRTPKPQFQTTGIAITNDVFAVATNPEIDIVIELVGG YTVARDLVLKAIENGKHVVTANKALIAVHGNEIFAKAQEKGVIVAFEAAVAGGIPVIKAIREGLSANRINWLAGIINGTG NFILSEMREKGRTFEDVLAEAQALGYAEADPTFDVEGIDAAHKLTILASIAFGIPLQFDKAYTEGITKLTTADVNYAEAL GYRIKHLGVARRTEAGIELRVHPTLIPADRLIANVNGVMNAVMVNGDAAGSTLFYGAGAGMEPTASSVVADLVDVVRAMT SDPENRVPHLAFQPDSLSDHPILPIESCESAYYLRIQAKDHPGVLAQVASILSERGINIESIMQKEVEEQDGLVPMILLT HRVLEQHINDAITALEALQGVVGPVVRIRVEHLN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00305 | YP_008207770.1 | Homoserine dehydrogenase | Not tested | AbaR25 | Protein | 2e-110 | 59 |
| BJAB0868_00309 | YP_008211635.1 | Homoserine dehydrogenase | Not tested | AbaR26 | Protein | 2e-110 | 59 |
