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Name : ndpA_1 (PFL_1060) Accession : YP_258191.1 Strain : Pseudomonas protegens Pf-5 Genome accession: NC_004129 Putative virulence/resistance : Unknown Product : nucleoid-associated protein NdpA Function : - COG functional category : R : General function prediction only COG ID : COG3081 EC number : - Position : 1208996 - 1210000 bp Length : 1005 bp Strand : - Note : identified by match to protein family HMM PF04245 DNA sequence : ATGCCGATCCGTCATTGCATCGTCCACCTGATCGACAAAAAACCCGACGGCAGCCCAGCAGTCCTGCACGCCCGCGATTC CGAACTGGCAGAGTCCGCGGCCATCGAGAACATGCTCGCCGACCTCAATGAAAGCTATAACGCCAAACAGGGCAAAGCCT GGGGCCTGTTCCACCCCGAGTCCGGTGCGTTCCCCTTCAGCGGCTGGCTGAAGGAGTACCTGGACGGCGGCCAGGACTTC ACCGCGTTCAGCCGGGTGGCGGTGGAGCATCTGCAGAAGCTGATGGAAGAGTCCAACCTGTCGGTGGGCGGCCACGTACT GTTCGCCCACTACCAGCAAGGCATGACCGACTACCTGGCGATCGCCCTGCTGCACCACAGCGAGGGCGTGGCGGTGACCG ACCAGCTGGACGTGACGCCGTCGCGCCACCTGGACCTGGGCCAGTTGCATCTGGCGGCGCGGATCAACATCTCCGAATGG CAGAACAACAAGCAGTCCAAGCAGTACATCTCCTTTATCAAGGGCAAGAACGGCAAGAAGGTCTCGGAGTATTTCCGCGA CTTCATCGGCTGCCAGGAAGGTGTCGACGGCCCGGGCGAGACCCGCACCCTGCTCAAGGCCTTCAGCGACTTCGTGGAAA GCGAGGACCTGCCGGAAGACTCGGCCCGGGAGAAGACCAAGACCCTGGTGGACTACGCCAGCAGCCAGGCCAAGCTCGGC GAACCCATGGGCCTGGAAGAACTCTCGGAACTGATCGACGAGGATCGCCCCAAGGCGTTCTACGATCACATCCGCAACAA GGACTACGGGCTGTCGCCGGAGATCCCGGCGGACAAACGCACCCTGAACCAGTTCCGCCGCTTCACCGGTCGCGCCGAGG GCCTGTCCATCAGTTTCGAGGCCCATCTGCTGGGTTCGAAGATCGAGTACGACGAAGAAGCCGGGACCCTGATCATCAAG GGCCTGCCCACCCAACTGACCGACCAGCTCAAGCGCCGTAACTGA Protein sequence : MPIRHCIVHLIDKKPDGSPAVLHARDSELAESAAIENMLADLNESYNAKQGKAWGLFHPESGAFPFSGWLKEYLDGGQDF TAFSRVAVEHLQKLMEESNLSVGGHVLFAHYQQGMTDYLAIALLHHSEGVAVTDQLDVTPSRHLDLGQLHLAARINISEW QNNKQSKQYISFIKGKNGKKVSEYFRDFIGCQEGVDGPGETRTLLKAFSDFVESEDLPEDSAREKTKTLVDYASSQAKLG EPMGLEELSELIDEDRPKAFYDHIRNKDYGLSPEIPADKRTLNQFRRFTGRAEGLSISFEAHLLGSKIEYDEEAGTLIIK GLPTQLTDQLKRRN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| RL104 | AAP84229.1 | conserved hypothetical protein | Not tested | PAPI-1 | Protein | 2e-136 | 83 |
