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Name : ribD_1 (PFL_1032) Accession : YP_258163.1 Strain : Pseudomonas protegens Pf-5 Genome accession: NC_004129 Putative virulence/resistance : Unknown Product : riboflavin biosynthesis protein RibD Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG1985 EC number : 1.1.1.193 Position : 1185376 - 1186482 bp Length : 1107 bp Strand : - Note : identified by match to protein family HMM PF00383; match to protein family HMM PF01872; match to protein family HMM TIGR00227; match to protein family HMM TIGR00326 DNA sequence : ATGACCTACTTCAGCGAAGTCGACTTCCAGCACATGCAGCACGCCCTGTCCCTGGCAGAACGGGGCAGCCACTCCACCTG GCCCAATCCGCGGGTGGGTTGCGTGATCGCCCATGGCTCGCAAGTGGTCGGCGAAGGCTGGCATCGGCGGGCCGGCGGGC CCCACGCCGAGGTGTTCGCCCTGCGCCAGGCCGGTGGCCTGGCGCGGGGTGCCACCGCCTACGTGACCATGGAACCCTGC AGCCATGTCGGACGCACCGGTGCCTGCCATCAGGCCCTGATCGACAGCGGCGTGCACAGCGTGGTGGTGGCCCATCAGGA CCCGTTCGAACAGGTCAACGGCCAGGGCATCGCCCAACTGCGCAACGCCGGAATCGAGGTGCGGGTCGGCCTGCTGGAAT CGGCGGCCCAGGAGTTGAACCGCGGCTTTCTGTCCACGGTGCGGCGCCAGCGGCCCTGGGTGCAACTGAAAATGGGCATG AGCCTGGACGGGCGCACGGCCCTGGACAATGGGCGCTCGAAGTGGATCACCAGCACCCGGGCCCGGGCCGACGTGCAGTA TTGGCGGGCCCGCAGCTCGGCGATCCTCACCGGCAGCGGTACCGTCCTGGCGGACGACCCACTGCTCACGGTACGCCAGC TGTCCTCCCCGGAGGCCCTGGCGCCAGTACGTGTGGTGCTCGACAGCCAGGGCCGGGTGCCCGCCACGGCGCGGGTGTTC AACGACCAGGCGCCGAGCCTGCACGTGGTGCACCGGGAGTGCCCGCTGGCCAGCAGCGACAGCGAGCAGGTCATGGCGCT GCCCGGGGACGACCAGGGCCTGCACCTTGAGCAGTTGCTGCACAACCTCAGCCAGCGCGGCCTGCACGACCTGCTGGTGG AAGCCGGCCCGACACTGGCCGGCAACCTGCTCAAGGCGCATCTGGTGGATGAGTTGCTGTTGTACGTGGCTCCGCGCCTG CTGGGGGATCTGGCCCGGCCGCTGGTGCACCTGCCGTGCTTCGACCGCCTGGAGGAGGCCCTGGACTTTGCCCTGTATGA CGTCAGCCAGCTGGGGCCGGACCTGCGTCTGCGCCTGCGGCCGGCTCAGCCGCCGAGCGCGCTATGA Protein sequence : MTYFSEVDFQHMQHALSLAERGSHSTWPNPRVGCVIAHGSQVVGEGWHRRAGGPHAEVFALRQAGGLARGATAYVTMEPC SHVGRTGACHQALIDSGVHSVVVAHQDPFEQVNGQGIAQLRNAGIEVRVGLLESAAQELNRGFLSTVRRQRPWVQLKMGM SLDGRTALDNGRSKWITSTRARADVQYWRARSSAILTGSGTVLADDPLLTVRQLSSPEALAPVRVVLDSQGRVPATARVF NDQAPSLHVVHRECPLASSDSEQVMALPGDDQGLHLEQLLHNLSQRGLHDLLVEAGPTLAGNLLKAHLVDELLLYVAPRL LGDLARPLVHLPCFDRLEEALDFALYDVSQLGPDLRLRLRPAQPPSAL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB0868_00293 | YP_008211619.1 | Pyrimidine deaminase | Not tested | AbaR26 | Protein | 2e-61 | 48 |
| BJAB07104_00289 | YP_008207754.1 | Pyrimidine deaminase | Not tested | AbaR25 | Protein | 2e-61 | 48 |
