Gene Information

Name : ssb-2 (SAG0566)
Accession : NP_687595.1
Strain : Streptococcus agalactiae 2603V/R
Genome accession: NC_004116
Putative virulence/resistance : Unknown
Product : prophage LambdaSa1, single-strand binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 568399 - 568815 bp
Length : 417 bp
Strand : +
Note : identified by match to PFAM protein family HMM PF00436

DNA sequence :
ATGATTAACAACATTGTACTAGTAGGTCGCATGACCAAGGATGCCGAACTTCGTTATACACCAAGTAATCAAGCGGTAGC
TACTTTTTCACTTGCAGTTAATCGTAATTTTAAAAATCAATCTGGCGAACGTGAGGCTGATTTTATTAACTGTGTTATTT
GGCGCCAACAAGCTGAAAACTTGGCTAACTGGGCAAAAAAAGGTGCTTTGGTTGGAATTACAGGTCGTATCCAAACGCGT
AATTATGAAAACCAACAAGGTCAACGTATCTATGTAACAGAAGTTGTTGCGGAAAATTTCCAATTATTAGAAAGTCGCAA
TAGCCAACAACAGACTAATCAAAGCGGCAATAGTTCTAATTCTTATTTTGGCAATGCCAACAAAATGGATATTTCAGATG
ATGACTTACCATTCTGA

Protein sequence :
MINNIVLVGRMTKDAELRYTPSNQAVATFSLAVNRNFKNQSGEREADFINCVIWRQQAENLANWAKKGALVGITGRIQTR
NYENQQGQRIYVTEVVAENFQLLESRNSQQQTNQSGNSSNSYFGNANKMDISDDDLPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SEQ_0802 YP_002746140.1 single-strand binding protein Not tested ¥ÕSeq2 Protein 2e-42 77
SAV0864 NP_371388.1 ssDNA-binding protein Not tested ¥ÕSa1 Protein 5e-28 63
SH1792 YP_253707.1 single strand DNA binding protein Not tested ¥ÕSh1 Protein 1e-27 62
SAOV_1956c YP_005737400.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa3 Protein 2e-27 61
ssb-2 NP_814280.1 single-strand binding protein Not tested Not named Protein 6e-36 60
ef0020 AAM75226.1 EF0020 Not tested Not named Protein 4e-36 60
SAOV_0290 YP_005735807.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa1 Protein 8e-28 60
SAOV_1081 YP_005736576.1 ssDNA-binding protein Not tested ¥ÕSa2 Protein 2e-27 60
ef0030 AAM75236.1 EF0030 Not tested Not named Protein 3e-21 48
ssb-3 NP_814291.1 single-strand binding protein Not tested Not named Protein 5e-21 48
EFAU085_00699 YP_008394223.1 single-strand binding protein Not tested Not named Protein 3e-16 42