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Name : SAG0193 (SAG0193) Accession : NP_687228.1 Strain : Streptococcus agalactiae 2603V/R Genome accession: NC_004116 Putative virulence/resistance : Unknown Product : alpha amylase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : - Position : 211466 - 213091 bp Length : 1626 bp Strand : + Note : identified by match to PFAM protein family HMM PF00128 DNA sequence : ATGACGATTGATAAACGTAAAGTTGTCTATCAAATTTATCCAAAATCATACAAAGACACAACTGGTAATGGGGTTGGTGA TCTTCGTGGTATTATCGAAAAATTACCCTATTTAGCAGAACTTGGTATTGATATGGTTTGGCTCAACCCATTTTATCCAA GTCCACAACGAGATAATGGATATGATATCTCTGATTATACAGCTATTAACCCTGATTTTGGAACGATGGACGATTTTGAA GAAATGATTGAGGTGGGACGTCAATACCGTATAGATTTTATGCTTGATATGGTGCTTAATCATTGTTCAATAGAACATGA GTGGTTTAAAAAAGCACTTGCAGGAGATCGCTACTATCAAGATTTCTTTATCTTACGTGATAATCCAACAGATTGGGTAT CTAAATTTGGTGGAAATGCTTGGGCACCATTTGGTGATACAGGGAAGTATTATCTTCATCTTTTTGATATCACTCAAGCT GACCTTAATTGGCGCAATGCCGATGTTCGCAAGGAACTTTTTAAAGTTGTCAATTTTTGGCGTGATAAAGGGGTTAAAGG TTTTCGATTTGATGTGATTAATTTAATTGGGAAAGATGAGATACTTGAGAACTGCCCAATTAATGATGGAAAACCAGCTT ATACTGATCGTCCAATAACACATGATTATCTCAAGATGTTGAATAATGCTAGTTTTGGACAAGATGATTCCTTCATGACA GTTGGTGAAATGTCTTCAACGACAATTGCAAATTGCATTCTTTACACTGCACCAGAACGTGAAGAGTTATCCATGGCTTT TAATTTTCACCACCTCAAAGTAGATTATAAAGATGGGCAAAAGTGGACCATTATGGCTTTTGATTTTCCTGCATTACGTG ACCTTTTCCATAGTTGGGGCGAAGGGATGAGCGAAGGAAATGGTTGGAATGCTTTATTCTATAATAATCATGACCAACCG CGAGCATTAAATCGTTTTGTAGACGTGAAACGTTTTCGAAATGAAGGAGCAACCATGTTAGCAGCATCTATCCACTTATC GCGTGGTACTCCTTATATATATATGGGTGAAGAAATCGGAATGCTTGATCCCGATTACAGTTCTATGGATGATTATGTGG ATATTGAGAGTTTGAATGCCTACCAAATAATGCTTGATGAAGGCAAGTCACAAGAAGAGGCATTTAGCATTATTCGAGCG AAATCTCGAGACAATTCTCGAGTACCAATGCAATGGGATGATAGTACGAATGCAGGTTTTTCTGAAGGCGCTCCATGGTT GAAAGTAGGAAAATCATATAAAGAAATCAATGTCGCAAAGGAGAAAACAGGGCTGATATTTACTTTCTATCAAGAGTTGA TAAGGCTACGTAAACAACTGCCAATAATAGCTGACGGGAATTATAAAGCAGCTTTCAAAGATAATGAAAAAGTATATGCT TTTGAACGCCATCTTGATAAGGAAAAACTTCTTGTTTTAAATAATTTCTTTGCTGAGAAAGTTAAGATAAAATTACCGGA GAATTATCTCCAAGGACAAGTTCTTCTATCAAATTATAAGGATGTTACTCTTGATGAAACGGTTACTTTGCAACCTTATC AAACTTTAGCTATCTTAGTGTCATAA Protein sequence : MTIDKRKVVYQIYPKSYKDTTGNGVGDLRGIIEKLPYLAELGIDMVWLNPFYPSPQRDNGYDISDYTAINPDFGTMDDFE EMIEVGRQYRIDFMLDMVLNHCSIEHEWFKKALAGDRYYQDFFILRDNPTDWVSKFGGNAWAPFGDTGKYYLHLFDITQA DLNWRNADVRKELFKVVNFWRDKGVKGFRFDVINLIGKDEILENCPINDGKPAYTDRPITHDYLKMLNNASFGQDDSFMT VGEMSSTTIANCILYTAPEREELSMAFNFHHLKVDYKDGQKWTIMAFDFPALRDLFHSWGEGMSEGNGWNALFYNNHDQP RALNRFVDVKRFRNEGATMLAASIHLSRGTPYIYMGEEIGMLDPDYSSMDDYVDIESLNAYQIMLDEGKSQEEAFSIIRA KSRDNSRVPMQWDDSTNAGFSEGAPWLKVGKSYKEINVAKEKTGLIFTFYQELIRLRKQLPIIADGNYKAAFKDNEKVYA FERHLDKEKLLVLNNFFAEKVKIKLPENYLQGQVLLSNYKDVTLDETVTLQPYQTLAILVS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 4e-107 | 43 |
