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Name : dnaC-1 (SAG1873) Accession : NP_688862.1 Strain : Streptococcus agalactiae 2603V/R Genome accession: NC_004116 Putative virulence/resistance : Unknown Product : prophage LambdaSa2, replicative DNA helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : - Position : 1860374 - 1861705 bp Length : 1332 bp Strand : - Note : identified by match to PFAM protein family HMM PF00772; In low GC Gram-postive bacteria this is known as dnaC. In other prokaryotes, functional equivalent known as dnaB. DNA sequence : ATGGATGAATTAAAAGTATTGCCTCACGATATCCAGGCTGAGCAGTCGGTTCTTGGTTCAATTTTTATCAAACCTGAAAA AATGATTGAGGTGGCTGAGTATCTGAAACCAAATGACTTTTACAGGCCAGCTCACAAGATTCTATTTAAGGCCATGGTGA GCCTTGCTGATCGTGGCGAGGCCATCGATATTGTCACAATCAAGTCAACGCTGGAAAGTACGGATGAACTTGGCATGGTT GGCGGTATCAGCTACATCGCTGAGATTGTTAATGCAGTGCCAACCAGCTCACACGCTGAGCATTATGCCAAGATTGTTGC TAAAAAAGCACAGCTACGGTCTATCATTGACAACTTGTCTGACTCAATTGGCAATGCCTATGATGAGGACATGGATATTG ATGAGATTATCGCAAAAGCTGAGCGATCACTTATCGAAGTTAGTCAAGCCAGTAACAAGAGTAGTTTCAGACCTATCCAT GATGTCCTTTTGGAAAATCATTCAAAGATTGAGGAACGCTCAAACAATACCAGTCAAATCACTGGTATTGAAACAGGATT TTATGACTTTGACAAGCTGATAACAGGCTTGCATGAAGACCAGCTAATTGTCTTAGCGGCACGGCCAGCGATGGGGAAGA CAGCCCTAGCTCTTAACATAGCTCAGAATGTGGCAACTAAGTCCAATAAGGCTGTGGCCGTCTTCTCGCTTGAAATGGGG GCTGAAAGCCTTGTTGAGCGGATGTTGTCAGCTGAAGGAACAATCATCAACCATCATATTAGAACAGGAAATTTGACGGT TAATGAGTGGCAACGTCTTATCTATGCACAGGGTCAGCTTGCTGAAGCTCCAATCTTTATAGATGACACAGCTGGAGTCA AGATTACTGACATCAGAGCAAGAGCTAGGAGGCTATCTCAAGAGACTGACGGACTTGGATTGATAGTCATTGACTATCTT CAACTCATTCAAGGGTCACGGTCTGACAACCGACAGCAAGAGGTATCTGAGATTTCTAGGCAGTTAAAGATTATTGCCAA GGAATTAAAAGTGCCAGTCATTGCACTATCACAGCTTAGCCGTGGGGTTGAGCAAAGAAACGACAAAAGGCCTATCATGT CCGACTTAAGGGAATCAGGCAGCATTGAGCAAGACGCTGATATTGTCGCCTTCCTCTATCGTGATGCTTATTACCAAGAC AAAAAAGAAGGTCAGCCAGAAAACGACATCACTGAGCTGATCATCAGAAAGAACAGACACGGAAACCTTGGCACAGTCAA GCTGTATTTCCACAAGGAATATACCAAGTTTTCTAGCGTTGAGGAGGAATGA Protein sequence : MDELKVLPHDIQAEQSVLGSIFIKPEKMIEVAEYLKPNDFYRPAHKILFKAMVSLADRGEAIDIVTIKSTLESTDELGMV GGISYIAEIVNAVPTSSHAEHYAKIVAKKAQLRSIIDNLSDSIGNAYDEDMDIDEIIAKAERSLIEVSQASNKSSFRPIH DVLLENHSKIEERSNNTSQITGIETGFYDFDKLITGLHEDQLIVLAARPAMGKTALALNIAQNVATKSNKAVAVFSLEMG AESLVERMLSAEGTIINHHIRTGNLTVNEWQRLIYAQGQLAEAPIFIDDTAGVKITDIRARARRLSQETDGLGLIVIDYL QLIQGSRSDNRQQEVSEISRQLKIIAKELKVPVIALSQLSRGVEQRNDKRPIMSDLRESGSIEQDADIVAFLYRDAYYQD KKEGQPENDITELIIRKNRHGNLGTVKLYFHKEYTKFSSVEEE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 1e-73 | 41 |
