Gene Information

Name : tll0820 (tll0820)
Accession : NP_681609.1
Strain : Thermosynechococcus elongatus BP-1
Genome accession: NC_004113
Putative virulence/resistance : Virulence
Product : periplasmic-binding protein of chelated iron ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0803
EC number : -
Position : 845761 - 846708 bp
Length : 948 bp
Strand : -
Note : -

DNA sequence : 
GTGCCCACCATGCGTGGTCTGAGTTGGTTACTGGTAGGAATTCTCTTGCTGGGTGGGTGTGCAGTCCCAGCCGCGGAGAA
TCGCCAAGAAACGCACTCCAGCCCAACCCCTAGAGATGAACGCCCCTTAGTGCTGACCACGTTTACCGTCCTGGCCGATA
TGGCGCAGCAGGTGGCGGGCGATCGCCTGCGGGTAGAGTCACTGATTAAACCGGGAGCTGAAGTTCACAGCTATGAATTT
ACCCCCAGTGACTTGGTGCGGGGCCAGGAAGCCGTCCTCATTTTAGAAAATGGTCTTGGCCTCGAACATTGGGGCGATCG
CTTCTACAAGAGCTTACCGAATGTGCCCAAGGTCACCCTCACAGAGGGGATTACCCCCATTCCCATTCAAGAGGGTACCT
ACCGAGGACAAGCCAACCCCCATGCTTGGATGTCGCCCCAAAATGCCCTGATTTATGTTGAAAACATTCGTAAAGCCCTC
ACAAACCTCGATCCTGCTGGTGCCAAGATCTATGCCGCCAACGCCAAAGCCTATCAAGCCCAAATTCGCGCCCTTGATCA
AGAGCTACGTCAAGCCCTTGCTCCCCTTCCTGCCCACAAACGCTACATTGTCACCTGTGAAGGTGCCTTCTCTTACCTCG
CGCGAGAGTATGACCTTACAGAGGTCTATCTCTGGCCACTGAATGCCGATCAGGAGGGGACGCCCCGCCAAATTGCGCGG
GTGATTGACATTGTGCGACGGCAACAGATTCCCGCCGTCTTTTGCGAAAGTACCGTCAATGCAAATCCCCAACAACAGGT
GGCACGGGAGTCGGGCGCTACCTTTGCTGGCATTTTCTATGTGGACTCCCTATCGCCCCCTGCGGGGAATGCCCCCACTT
ACCTTGACCTACTCAAGTCCAACATCAACACCCTGATCCGTGGTCTCAGCGGGAGGACAGCCCCATGA

Protein sequence : 
MPTMRGLSWLLVGILLLGGCAVPAAENRQETHSSPTPRDERPLVLTTFTVLADMAQQVAGDRLRVESLIKPGAEVHSYEF
TPSDLVRGQEAVLILENGLGLEHWGDRFYKSLPNVPKVTLTEGITPIPIQEGTYRGQANPHAWMSPQNALIYVENIRKAL
TNLDPAGAKIYAANAKAYQAQIRALDQELRQALAPLPAHKRYIVTCEGAFSYLAREYDLTEVYLWPLNADQEGTPRQIAR
VIDIVRRQQIPAVFCESTVNANPQQQVARESGATFAGIFYVDSLSPPAGNAPTYLDLLKSNINTLIRGLSGRTAP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 1e-70 56
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 1e-70 56
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 8e-71 56
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-70 56
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 1e-70 56

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tll0820 NP_681609.1 periplasmic-binding protein of chelated iron ABC transporter BAC0349 Protein 5e-71 56
tll0820 NP_681609.1 periplasmic-binding protein of chelated iron ABC transporter BAC0439 Protein 2e-69 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tll0820 NP_681609.1 periplasmic-binding protein of chelated iron ABC transporter VFG0525 Protein 5e-71 56