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Name : clpC (tll0307) Accession : NP_681098.1 Strain : Thermosynechococcus elongatus BP-1 Genome accession: NC_004113 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease regulatory subunit Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 290720 - 293194 bp Length : 2475 bp Strand : - Note : - DNA sequence : ATGTTTGAACGCTTTACAGAAAAAGCCATTAAAGTCATCATGCTGGCACAGGAAGAGGCTCGCCGCCTCGGCCACAACTT TGTCGGTACCGAACAAATTCTCCTCGGACTGATTGGTGAAGGTACCGGTGTGGCCGCCAAGGTTCTACGTTCTATGGGCG TGAACCTCAAGGATGCCCGCATCGAAGTGGAAAAAATTATTGGCCGTGGATCTGGTTTTGTCGCGGTGGAGATTCCCTTT ACCCCCCGTGCCAAGCGAGTGTTAGAACTCTCCCTTGAAGAAGCTCGTCAACTGGGTCACAACTACATTGGTACTGAACA CCTCCTGCTGGGACTGATCCGCGAAGGGGAAGGGGTGGCCGCCCGCGTCCTTGAAAATTTGGGTGTTGATCTATCGAAAG TGCGCACCCAAGTCATTCGGATGCTGGGTGAAACCGCAGAAGTGACCGCTGGCGCTAGCCAAGGACGTACCAAAACGCCG ACGCTGGACGAATTTGGTGTCAACCTCACCCAGCTGGCTATTGAGGGCAAGCTAGATCCCGTGGTGGGTCGGCAAAAAGA AATTGAGCGGGTGATTCAAATTCTGGGCCGTCGCACCAAAAATAACCCCGTGCTGATCGGTGAACCGGGGGTGGGTAAAA CCGCGATTGCTGAAGGCCTGGCCCAGCGCATTGCCAACAAAGATGTTCCCGACATTCTTGAAGACAAGCGGGTGGTCACC CTCGATATCGGCCTCTTGGTGGCAGGCACGAAGTACCGGGGTGAATTTGAAGAGCGGCTGAAAAAGATCATGGATGAAAT CCGCCAAGCCGGTAACGTGATCTTGGTGATTGACGAGGTGCACACGTTAATTGGGGCTGGGGCGGCGGAGGGTGCTATTG ATGCAGCCAATATCCTCAAACCCGCCCTGGCTCGTGGGGAGTTGCAGTGCATTGGTGCCACTACTTTGGATGAGTACCGC AAACACATTGAGCGGGATGCCGCCTTGGAGCGGCGCTTCCAACCGGTGATGGTGGGTGAGCCCTCCGTTGAGGAAACCAT TGAGATCCTCTACGGCCTGCGGGAACGCTATGAGAAGCACCACAAACTGAAAATTTCCGATGAAGCCCTTGAGGCGGCAG CGAAGCTGTCCGATCGCTACATTAGCGATCGCTATCTACCGGACAAGGCCATTGACCTCATTGACGAAGCAGGCTCACGG GTGCGCCTGATTAACTCGCAACTACCCCCTGCGGCCAAGGAACTGGATCGCGAATTGCGGCAAGTGCTCAAAGAAAAAGA CGATGCCGTGCGGGCCCAAAACTTTGACAAAGCGGGTGAACTGCGCGATCGCGAGATGGAACTGAAAGCACAAATCCGTG CCATTGCCCAGCAGAAAAAAGCCGAAATCGCCAACGGTGAAGAGGAGACCCCCGTCGTCACCGAAGAGGACATTGCCCAC ATTGTCGCCTCGTGGACGGGTGTGCCCGTTAGCAAGCTCACCGAAAGCGAGTCGGAAAAACTGCTGCACATGGAGGAGAC CTTGCACCAGCGGGTCATTGGCCAAGATGAAGCGGTGAAAGCGATCTCCCGCGCCATTCGCCGTGCCCGTGTCGGTCTCA AAAATCCCAATCGTCCCATTGCCAGCTTTATCTTCTCGGGGCCAACCGGTGTCGGTAAAACCGAGTTAACGAAAGCCTTG GCGGCCTACTTCTTTGGCTCGGAAGAGGCGATGATCCGCTTGGATATGTCCGAATACATGGAGCGGCATACCGTCTCCAA GCTCATCGGTTCGCCCCCCGGCTATGTTGGCTACAACGAGGGCGGTCAGCTCACCGAAGCCGTGCGGCGGCGTCCCTATA CGGTGGTGCTCTTCGATGAAATCGAGAAAGCTCACCCCGATGTCTTTAACCTGCTACTGCAAATCCTTGAGGATGGCCGT CTTACTGACTCCAAGGGACGTACCGTTGACTTCAAGAATACCCTCTTGATCATGACCTCGAACATTGGCTCCAAGGTGAT TGAGAAGGGGGCGGCGGGCCTTGGCTTTGAGTTTGGCACTGAGGATGCCGCCGAATCCCAATACAACCGCATTCGCTCCT TGGTGAATGAGGAACTGAAGCAATACTTCCGCCCTGAATTCCTCAACCGCCTTGATGAGATTATTGTCTTCCGTCAATTG ACGAAGGACGAAGTCAAGCAAATTGCCGACATTCTCCTTAAGGAAGTGTTCTCGCGCCTCACAGAAAAAGGCATCACCTT GGAGGTGACCGAACGCTTCAAGGAACGGCTCATTGATGAGGGCTACAACCCCAGCTATGGAGCGCGGCCCCTGCGGCGGG CAATTATGCGCCTTTTGGAGGACACCTTGGCTGAGGAAATGCTCTCTGGCCGCATCCGCGAAGGCGACACTGCCCTCATT GATGTGGATGAATCCGGTCAAGTGAAGATCCAAGCTCAACCTCGGCGTGAGCTATTGCCCCAGGCGGTTGAGTAG Protein sequence : MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLRSMGVNLKDARIEVEKIIGRGSGFVAVEIPF TPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRMLGETAEVTAGASQGRTKTP TLDEFGVNLTQLAIEGKLDPVVGRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIANKDVPDILEDKRVVT LDIGLLVAGTKYRGEFEERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYR KHIERDAALERRFQPVMVGEPSVEETIEILYGLRERYEKHHKLKISDEALEAAAKLSDRYISDRYLPDKAIDLIDEAGSR VRLINSQLPPAAKELDRELRQVLKEKDDAVRAQNFDKAGELRDREMELKAQIRAIAQQKKAEIANGEEETPVVTEEDIAH IVASWTGVPVSKLTESESEKLLHMEETLHQRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKAL AAYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQILEDGR LTDSKGRTVDFKNTLLIMTSNIGSKVIEKGAAGLGFEFGTEDAAESQYNRIRSLVNEELKQYFRPEFLNRLDEIIVFRQL TKDEVKQIADILLKEVFSRLTEKGITLEVTERFKERLIDEGYNPSYGARPLRRAIMRLLEDTLAEEMLSGRIREGDTALI DVDESGQVKIQAQPRRELLPQAVE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 60 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | NP_681098.1 | ATP-dependent Clp protease regulatory subunit | VFG0079 | Protein | 0.0 | 62 |
| clpC | NP_681098.1 | ATP-dependent Clp protease regulatory subunit | VFG0080 | Protein | 2e-154 | 53 |
