Gene Information

Name : tlr2423 (tlr2423)
Accession : NP_683213.1
Strain : Thermosynechococcus elongatus BP-1
Genome accession: NC_004113
Putative virulence/resistance : Virulence
Product : two-component response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2537144 - 2537872 bp
Length : 729 bp
Strand : +
Note : -

DNA sequence : 
ATGAAGCCCCGCATCTTAATCATTGATGATGACCCTGCGATCGCTGACGTTTTGGCAATTAACCTGCAAATGGCGGGCTA
CGAGGTCACAAAGTCCTTAGATGGGATGCAAGGGCAAGCCCTCGCTGTGCAACTGTCTCCCGACCTGATTCTCCTTGACC
TGATGTTGCCCCAAGTCGATGGCTTCACCATTTGCCAACGCCTGCGACGCGATCCGCGTACCCAAGATATTCCGATTTTG
ATGCTGACGGCCCTCAGCCAAACCCATAACAAGGTGGAGGGGTTTAATGCCGGTGCCGATGACTATCTCACCAAACCCTT
TGAATTGGAGGAAATGCTGGCACGGGTACGCGCCCTCTTGCGACGGGCCGATCGCATTCCTGCCACGGCAGGCCACCGAG
AAATTCTCAGCTATGGTCCATTGACACTGGTGCCCGAACGATTTGAGGTCTCTTGGTTTGGCAAAATCATTAAGCTGACG
CGCCTTGAGTTTGAACTCCTCCACTGTCTGCTGCAACGCCACGGCCAAACCGTTTCTCCCAGTGAAATCCTTAAGGAAGT
CTGGGGCTATGACCCCGATGATGACATTGAAACCATCCGCGTCCATGTGCGTCACCTGCGCACCAAACTGGAACCCGATC
CCCGCAATCCTCGCTATATTAAAACGGTTTATGGCGCTGGGTATTGTTTAGAGTTGCCAAGTCATATTGAACCCCCCAAT
GCATCCTAG

Protein sequence : 
MKPRILIIDDDPAIADVLAINLQMAGYEVTKSLDGMQGQALAVQLSPDLILLDLMLPQVDGFTICQRLRRDPRTQDIPIL
MLTALSQTHNKVEGFNAGADDYLTKPFELEEMLARVRALLRRADRIPATAGHREILSYGPLTLVPERFEVSWFGKIIKLT
RLEFELLHCLLQRHGQTVSPSEILKEVWGYDPDDDIETIRVHVRHLRTKLEPDPRNPRYIKTVYGAGYCLELPSHIEPPN
AS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-14 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tlr2423 NP_683213.1 two-component response regulator HE999704.1.gene2815. Protein 1e-23 42
tlr2423 NP_683213.1 two-component response regulator BAC0308 Protein 1e-13 42
tlr2423 NP_683213.1 two-component response regulator AE000516.2.gene3505. Protein 1e-19 42
tlr2423 NP_683213.1 two-component response regulator NC_002952.2859905.p0 Protein 1e-25 41
tlr2423 NP_683213.1 two-component response regulator NC_002951.3237708.p0 Protein 1e-25 41
tlr2423 NP_683213.1 two-component response regulator NC_003923.1003749.p0 Protein 1e-25 41
tlr2423 NP_683213.1 two-component response regulator NC_002758.1121668.p0 Protein 1e-25 41
tlr2423 NP_683213.1 two-component response regulator NC_007622.3794472.p0 Protein 9e-26 41
tlr2423 NP_683213.1 two-component response regulator NC_009641.5332272.p0 Protein 1e-25 41
tlr2423 NP_683213.1 two-component response regulator NC_013450.8614421.p0 Protein 1e-25 41
tlr2423 NP_683213.1 two-component response regulator NC_007793.3914279.p0 Protein 1e-25 41
tlr2423 NP_683213.1 two-component response regulator NC_002745.1124361.p0 Protein 1e-25 41
tlr2423 NP_683213.1 two-component response regulator NC_009782.5559369.p0 Protein 1e-25 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tlr2423 NP_683213.1 two-component response regulator VFG1390 Protein 2e-21 43
tlr2423 NP_683213.1 two-component response regulator VFG0596 Protein 7e-15 42