Gene Information

Name : ribD (tlr2152)
Accession : NP_682942.1
Strain : Thermosynechococcus elongatus BP-1
Genome accession: NC_004113
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0117
EC number : -
Position : 2233019 - 2234158 bp
Length : 1140 bp
Strand : +
Note : -

DNA sequence :
ATGCGCTCAGCCCCCGTTGTGGAGGAAATAGCCACGATTGATGCCCAGTATATGGGGCGCTGCCTTGAGTTAGCGGCTCG
GGCCAAAGGCCGTACGGCTCCGAATCCCCTCGTCGGCTGTGTGATTGTGGCGGAGGGACGGGTCATTGGGGAGGGATTTC
ATCCCAAGGCGGGGGAACCCCATGCCGAGGTCTTTGCCCTGCGCAGTGTCAGCGAGAGCGATCGCCCCCTCCTGAGCAAG
GCCACCCTCTACGTCAACCTTGAGCCCTGCAACCACTATGGCCGCACTCCCCCCTGCACTGAGGCAATTCTTGCCGCGGG
TATTCCCAAGGTGGTGGTGGGCATGATTGATCCGAATCCCCAAGTGGCCGGAGCAGGGGTAGAGCGGCTGCGCTCAGCGG
GCATAGAAGTCACTGTTGGCGTGCGGGAAGCAGACTGTCAACGCCTGAACGAAGCGTTTGTCCATCGGGTGCGCTACCAG
CGTCCCTTTGGCATTTTGAAGTACGCCATGACCCTCGACGGCAAAATTGCCTCCAGGGCGGGTCATAGTCTCTGGGTGAG
TGGCGAAGCCGCACGCGCCATGGTGCATCAACTGCGCTCTGAATGCGATGCTGTCATTGTGGGGGGCAATACCGTGCGTC
TAGATAATCCCCTCTTGACCTCACGCCATGGGCACAATCCCCTACGGGTGGTCATGAGCCGTACCCTTGATCTGCCACCG
GATGCCTCTTTGTGGGACACAACCGCAGCGGCGACCTTGGTGGTTACTTCCGCTTCGCCCCAGCATCCCCTCATTCCCCA
ATTGCAGGCACGGGGTGTGGAGGTGGTCCACCGCGAGCCCCTAACACCGACTGCCGTTATGGCACTGCTTCATCAACGGG
GCATCATGACAGCGCTTTGGGAGTGTGGCGGTTCCCTCGCAGCGGCAGCGATCGCCGAAGGCATGGTACAGAAGGTGTGG
GCATTTATTGCGCCAAAAATTATCGGTGGCTTCGATGCCCCCACCCCAGTGGCCGATTTAGGCTTGACCAAGATGCATGA
GGCCTTGTACCTAGAGGACGTGACTTGGCAAACCGTGGGCGAGGACATTCTCGCAGTGGGCTACCTACCCGCTAAGCCTC
CGGTGCTGTCACTTCAATAA

Protein sequence :
MRSAPVVEEIATIDAQYMGRCLELAARAKGRTAPNPLVGCVIVAEGRVIGEGFHPKAGEPHAEVFALRSVSESDRPLLSK
ATLYVNLEPCNHYGRTPPCTEAILAAGIPKVVVGMIDPNPQVAGAGVERLRSAGIEVTVGVREADCQRLNEAFVHRVRYQ
RPFGILKYAMTLDGKIASRAGHSLWVSGEAARAMVHQLRSECDAVIVGGNTVRLDNPLLTSRHGHNPLRVVMSRTLDLPP
DASLWDTTAAATLVVTSASPQHPLIPQLQARGVEVVHREPLTPTAVMALLHQRGIMTALWECGGSLAAAAIAEGMVQKVW
AFIAPKIIGGFDAPTPVADLGLTKMHEALYLEDVTWQTVGEDILAVGYLPAKPPVLSLQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 2e-41 42
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 2e-41 42