Gene Information

Name : y0550 (y0550)
Accession : NP_667887.1
Strain : Yersinia pestis KIM
Genome accession: NC_004088
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG2301
EC number : -
Position : 617147 - 618106 bp
Length : 960 bp
Strand : -
Note : residues 1 to 310 of 319 are 66.45 pct identical to residues 1 to 310 of 318 from GenPept : >gb|AAG55720.1|AE005309_10 (AE005309) Z1605 gene product [Escherichia coli O157:H7 EDL933]

DNA sequence :
ATGAAATCAACACCTTCTGCGTACGCTTTGGGGGCAACACTTTATATGCCTGCTACGCGTACCGATATTGCCGATATTAT
TATTCATAATAAAATTTCCGGCCTGCGCTCACTGGTAATCTGCCTGGAAGATGCCGTGAGCGAAGATGATGTGCCACTGG
CTATCTCTCAACTCAGCACCTTATTAGGTACGCTAGCCGTAGAGAAAAAACGCGATGGATCTGCCCATTGGCCGCTGATC
TTTGTTCGTCCACGTCATGAAGCGATGGGGCTAGCATTAATCACCCGTTTTAATCTGAGCGCTATCAATGGCTTTGTGTT
GCCAAAGTTTACCCAAGCATCCATTACTACCTGGTGGGAGATCATGAAAGAGACTCATCTGTGCATGATGCCAACGCTGG
AAACTGAAGATGTCTTTGATGTAGCGAAGATGAGTACTCTCGCCAGGGAGCTGGAAAATCACCCCTCTCGTCAACGCATT
GTTGCGCTGCGCATTGGTGGTAATGATCTGATGAGTGTTATTTCGATGCGGCGCTCGCGTAAGTTGACGCTGTACGATGG
CCCGATGGGCTACGTGATCAAAATGCTGGTTTCGGTATTCTGTCCAAAGAATTTTGCGTTAACCGCACCGGTCTGTGAGC
AAATAGATAATCCGCAGTTGCTGGAAACAGAACTGGCGCTGGATATCGCTCATGGTCTGGTGGGGAAAACCGCCATTCAT
CCAAGCCAGATCGAAGTCATTCAACGCGCCTTAATGGTCGACACTCATGATCACGCTGATGCATTGCGCATCCTCAATTC
AACACAGGCAGTTTTCAAGTCTCAGGGGGCGATGTGTGAACCATCTACTCATAAGCGCTGGGCGGCGGCAATCCTTGAGC
GTGCACAATATTACGGAATAATGCCTGATTTTACTGCGATGGCGGTTCGTGATGCGCCAAGAAAACATCAGAGTGGATAA

Protein sequence :
MKSTPSAYALGATLYMPATRTDIADIIIHNKISGLRSLVICLEDAVSEDDVPLAISQLSTLLGTLAVEKKRDGSAHWPLI
FVRPRHEAMGLALITRFNLSAINGFVLPKFTQASITTWWEIMKETHLCMMPTLETEDVFDVAKMSTLARELENHPSRQRI
VALRIGGNDLMSVISMRRSRKLTLYDGPMGYVIKMLVSVFCPKNFALTAPVCEQIDNPQLLETELALDIAHGLVGKTAIH
PSQIEVIQRALMVDTHDHADALRILNSTQAVFKSQGAMCEPSTHKRWAAAILERAQYYGIMPDFTAMAVRDAPRKHQSG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1605 NP_287109.1 hypothetical protein Not tested TAI Protein 9e-107 67
Z1166 NP_286701.1 hypothetical protein Not tested TAI Protein 9e-107 67
unnamed ACY75548.1 conserved hypothetical protein Not tested Tn6060 Protein 2e-61 50