Gene Information

Name : y0532 (y0532)
Accession : NP_667869.1
Strain : Yersinia pestis KIM
Genome accession: NC_004088
Putative virulence/resistance : Virulence
Product : type III secretion system component
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG4791
EC number : -
Position : 598437 - 599231 bp
Length : 795 bp
Strand : +
Note : residues 8 to 240 of 264 are 51.70 pct identical to residues 9 to 242 of 259 from GenPept : >emb|CAD01944.1| (AL627271) type III secretion protein [Salmonella enterica subsp. enterica serovar Typhi]

DNA sequence : 
ATGACTGACGTCCTCCCCGGTCTAACCGCACTCGCATTAGCCATGATGCGGCCCTACGGTATCTTACTGATATTACCGCT
GTTTACCGCCCGCAGTTTGGGGAGCAGCTTATTGCGTAATGGCTTGATTGTTGCCATCGCGCTGCCGGTCACGCCGCTAT
TTTTATCCGCACCCATCATCACCAATAGTAGCCCGGTCACCTGGATTGGGGTGTTATGCACGGAGCTACTCATTGGGGTG
GTGATGGGGTTTGTCGCCGCATTGCCTTTCTGGGCTATGAATATGGCGGGTTTCCTGATCGATACTTTACGGGGGGCAAC
GATGTCCACGTTGTTTAACCCCGGTATGGGCGTCGAATCCTCCCTTTTTGGTGTGCTGTTTACCCAAATATTAACGGTAC
TGTTCCTGATTTCTGGCGGTTTTAATCAGGTGTTGGCGGCGTTGTACGGCTCGTACGATAGCTTACCCATCGGCCAGGGT
ATCCAGCCTGCTGCAGATCTATTGCTCTTTCTGCAAACTGAGTGGCAGATGATGTTCGAGCTTTGCTTGTGCTTTGCCCT
ACCGGCACTGCTGGTCATGGTGTTGGCTGATCTCTCTTTAGGATTAATTAACCGCTCGGCCCGGCAACTGAATGTCTTTT
TTCTGGCGATGCCCATTAAAAGCGCACTGGCGCTTTTTCTCTTACTGATCAGCCTGCCTTATGGCCTGCATCACTACCTG
TCCCGTATGAGCGATACTGAACAGAAGATTGGTACGTTGATCCCGTTGATTAAAGGGGGGAATGATGTCCACTGA

Protein sequence : 
MTDVLPGLTALALAMMRPYGILLILPLFTARSLGSSLLRNGLIVAIALPVTPLFLSAPIITNSSPVTWIGVLCTELLIGV
VMGFVAALPFWAMNMAGFLIDTLRGATMSTLFNPGMGVESSLFGVLFTQILTVLFLISGGFNQVLAALYGSYDSLPIGQG
IQPAADLLLFLQTEWQMMFELCLCFALPALLVMVLADLSLGLINRSARQLNVFFLAMPIKSALALFLLLISLPYGLHHYL
SRMSDTEQKIGTLIPLIKGGNDVH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YPO0272 YP_002345354.1 type III secretion apparatus protein Virulence Not named Protein 4e-105 100
ssaT NP_456107.1 putative type III secretion protein Virulence SPI-2 Protein 1e-44 52
ssaT NP_805092.1 type III secretion protein Virulence SPI-2 Protein 1e-44 52
ssaT YP_216429.1 secretion system apparatus protein SsaT Virulence SPI-2 Protein 9e-45 52
ssaT NP_460386.1 type III secretion system apparatus protein Virulence SPI-2 Protein 3e-44 51
ssaT CAA68201.1 secretion system apparatus, SsaT Virulence SPI-2 Protein 2e-44 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
y0532 NP_667869.1 type III secretion system component VFG0521 Protein 1e-44 51