Gene Information

Name : y0517 (y0517)
Accession : NP_667855.1
Strain : Yersinia pestis KIM
Genome accession: NC_004088
Putative virulence/resistance : Unknown
Product : type III secretion system component
Function : -
COG functional category : K : Transcription
COG ID : COG4977
EC number : -
Position : 588706 - 589326 bp
Length : 621 bp
Strand : +
Note : residues 108 to 202 of 206 are 37.89 pct identical to residues 169 to 263 of 271 from GenPept : >gb|AAK69232.1|AF336309_27 (AF336309) transcriptional activator VirF [Yersinia enterocolitica]

DNA sequence :
GTGATTGCCGATGAGCAGGCCAGTGCCTCTGCGTTTGCAAACAGTGCCATCACCTCTATATTATGTTACCCAATAGATCT
TTTTCCGATATATCAGGATTTAGCCAGAAGAACATTACCGTTGAATAAAGGCCATCTTCCTCATGCGGTAAATGATAAAT
ATAAAGTGTTGCCAGCGAATGTTGAAATTATACAAGCCGCTGAAGAATTAATTAATATAGAGCGTGTTGCCTCTTTGCGA
TTTCTTTATCTTTATTGTTTAGGTATCGATAACGTTTATTTTTCCAAGCTGTTGGACTCCATTGTGGGTACGAATAACGA
ACTACTTGAGTTTTTCGAAAAGAATCGGCTCAACCCATGGAGCGTTTCACGCTATGCCAATGAATTGGGTATTTCGACCC
GGAAATTGAATTTCCTGTTTTATGAGAAATTCGGCATGTCGGCGAAACAGTGGTTACTGGATCAGCGTTTGAAAAAGGGC
TGTGAGCTATTACTTTCGACCCGCTTACGGGTGGCTGATATTGCCATGGAGTGTGGTTTTAGTAATCACGCGCATTTCTC
AGATAGCTTTCGTCGGCGCTTTCAACAATGCCCATCGCATATGCGTTCACTTATTGAATAG

Protein sequence :
MIADEQASASAFANSAITSILCYPIDLFPIYQDLARRTLPLNKGHLPHAVNDKYKVLPANVEIIQAAEELINIERVASLR
FLYLYCLGIDNVYFSKLLDSIVGTNNELLEFFEKNRLNPWSVSRYANELGISTRKLNFLFYEKFGMSAKQWLLDQRLKKG
CELLLSTRLRVADIAMECGFSNHAHFSDSFRRRFQQCPSHMRSLIE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YPO0260 YP_002345340.1 AraC family transcriptional regulator Not tested Not named Protein 2e-93 100